Item | Value |
---|---|
gene id | G1461178 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 52046698 ~ 52095402 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1671638 | True | 488 | lncRNA | 0.42 | 2 | 52046698 | 52095402 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
csf1 | csf1 | coding | upstream | 406286 | 51601433 ~ 51640412 (+) |
apobec2a | LOC100196684 | coding | upstream | 983937 | 51052682 ~ 51062761 (+) |
LOC110494047 | btg2 | coding | upstream | 1149254 | 50894903 ~ 50897444 (+) |
rbbp5 | LOC106565113 | coding | upstream | 1185600 | 50852607 ~ 50861098 (+) |
LOC110494043 | LOC106565114 | coding | upstream | 1206294 | 50837015 ~ 50840404 (+) |
LOC110494060 | LOC106565094 | coding | downstream | 95197 | 52190599 ~ 52273991 (+) |
LOC110494061 | LOC106565309 | coding | downstream | 178852 | 52274254 ~ 52280244 (+) |
LOC110494062 | LOC106565093 | coding | downstream | 195824 | 52291226 ~ 52298261 (+) |
zc3h11a | zc3h11a | coding | downstream | 246655 | 52342057 ~ 52363993 (+) |
LOC110494066 | LOC106565091 | coding | downstream | 268693 | 52364095 ~ 52368350 (+) |
G1461227 | NA | non-coding | upstream | 52871 | 51993048 ~ 51993827 (+) |
G1461152 | NA | non-coding | upstream | 157854 | 51884237 ~ 51888844 (+) |
G1461150 | LOC106565097 | non-coding | upstream | 170315 | 51874368 ~ 51876383 (+) |
G1461060 | NA | non-coding | upstream | 339362 | 51704391 ~ 51707336 (+) |
G1461036 | NA | non-coding | upstream | 382625 | 51662056 ~ 51664073 (+) |
G1461181 | NA | non-coding | downstream | 7090 | 52102492 ~ 52102997 (+) |
G1461292 | NA | non-coding | downstream | 13813 | 52109215 ~ 52109575 (+) |
G1461175 | NA | non-coding | downstream | 16321 | 52111723 ~ 52113123 (+) |
G1461299 | NA | non-coding | downstream | 31413 | 52126815 ~ 52127051 (+) |
G1461302 | NA | non-coding | downstream | 35191 | 52130593 ~ 52130810 (+) |
G1460249 | LOC106565103 | other | upstream | 955809 | 51080132 ~ 51137770 (+) |
G1459769 | NA | other | upstream | 1269626 | 50776529 ~ 50777072 (+) |
atxn7l2a | LOC106565127 | other | upstream | 1610992 | 50427145 ~ 50437612 (+) |
LOC110494957 | qrich1 | other | upstream | 1863002 | 50181045 ~ 50192699 (+) |
G1464092 | LOC106565344 | other | downstream | 2078612 | 54147039 ~ 54189617 (+) |
LOC110494100 | LOC106565348 | other | downstream | 2160979 | 54256327 ~ 54264616 (+) |
LOC110494110 | LOC106565356 | other | downstream | 2376303 | 54471705 ~ 54474472 (+) |
G1466124 | NA | other | downstream | 3901246 | 55996648 ~ 55998347 (+) |
G1466131 | NA | other | downstream | 3920175 | 56015577 ~ 56016613 (+) |