G1461178



Basic Information


Item Value
gene id G1461178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52046698 ~ 52095402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1671638
ggggccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagagagagagagagagagagagagagagagagagagagagaggatgtgttattttactgGGCGGAAATATACTGTTTAATGAAAAACATTCCTTAAAAGAACTCTATGTGTATGTGTTAAATGATTCTGATTGCAGAAGAGGAAATGTTAGGTGATATTCAAGCATGTGCACACATTTCTATTTTCCCAAACTGTATCAATGGCATACTGTACTTATAACACACAATATACCCCACTTTCTCCCTATGTCTACtgctctctttccatctctctctttggaAATGTGGCTTTGTATAGTTCATGTCCATAGTGTATCATGATGTCTTAACTCCCCAAACTGTGCAGTGTGCAACCTTCATAGCTACTACCCAGTATCGAGCTCCTGCATCATCTGGCTGTCCGTCTGGCTGTATGTTTGGTTGTC

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1671638 True 488 lncRNA 0.42 2 52046698 52095402

Neighbor


gene id symbol gene type direction distance location
csf1 csf1 coding upstream 406286 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 983937 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1149254 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1185600 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 1206294 50837015 ~ 50840404 (+)
LOC110494060 LOC106565094 coding downstream 95197 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 178852 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 195824 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 246655 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 268693 52364095 ~ 52368350 (+)
G1461227 NA non-coding upstream 52871 51993048 ~ 51993827 (+)
G1461152 NA non-coding upstream 157854 51884237 ~ 51888844 (+)
G1461150 LOC106565097 non-coding upstream 170315 51874368 ~ 51876383 (+)
G1461060 NA non-coding upstream 339362 51704391 ~ 51707336 (+)
G1461036 NA non-coding upstream 382625 51662056 ~ 51664073 (+)
G1461181 NA non-coding downstream 7090 52102492 ~ 52102997 (+)
G1461292 NA non-coding downstream 13813 52109215 ~ 52109575 (+)
G1461175 NA non-coding downstream 16321 52111723 ~ 52113123 (+)
G1461299 NA non-coding downstream 31413 52126815 ~ 52127051 (+)
G1461302 NA non-coding downstream 35191 52130593 ~ 52130810 (+)
G1460249 LOC106565103 other upstream 955809 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1269626 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1610992 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1863002 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2078612 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2160979 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2376303 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3901246 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3920175 56015577 ~ 56016613 (+)

Expression



Co-expression Network