G1461181


Basic Information

Item Value
gene id G1461181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52102492 ~ 52102997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671641
GATTTAAATACCCTGGTAAGGGTTAACAGAAGGGAGTTAAATACCCAGGTAAGGGTTAACAGAAGGGAGTTAACAGAAGGGAGTTAAATACCCAGGTAAGGGTTAACAGAAGGGAGTTAAATACCCAGATAAGGGTTAACAGAAGGGAGTTAAATACCCAGGTAAGGGTTAACAGAAGGGAGTTAAATACCCAGGTAAGGGTTAACAGAAGGGAGTTAAATACCCAGGTAAGGGTTAACAGAAGGGAGTTAAATACCCAGGTAAGAGTTAACAGAAGAGAGTTAAATACCTAGGTAAGGTAATGATGTGGGGTGGGAGTGGGTCAAGCTCCAATGTAAGAGTTTACAGGTCAAACATAAATGCAAACGTAATGGGTTATTCAATTACGGAGAGCAGCACCCATGTAA

Function

NR:

description
PREDICTED: putative protein TPRXL

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671641 True 407 lncRNA 0.41 2 52102492 52102997

Neighbor

gene id symbol gene type direction distance location
csf1 csf1 coding upstream 462080 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 1039731 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1205048 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1241394 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 1262088 50837015 ~ 50840404 (+)
LOC110494060 LOC106565094 coding downstream 87602 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 171257 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 188229 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 239060 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 261098 52364095 ~ 52368350 (+)
G1461178 NA non-coding upstream 7090 52046698 ~ 52095402 (+)
G1461227 NA non-coding upstream 108665 51993048 ~ 51993827 (+)
G1461152 NA non-coding upstream 213648 51884237 ~ 51888844 (+)
G1461150 LOC106565097 non-coding upstream 226109 51874368 ~ 51876383 (+)
G1461060 NA non-coding upstream 395156 51704391 ~ 51707336 (+)
G1461292 NA non-coding downstream 6218 52109215 ~ 52109575 (+)
G1461175 NA non-coding downstream 8726 52111723 ~ 52113123 (+)
G1461299 NA non-coding downstream 23818 52126815 ~ 52127051 (+)
G1461302 NA non-coding downstream 27596 52130593 ~ 52130810 (+)
G1461331 NA non-coding downstream 73742 52176739 ~ 52176958 (+)
G1460249 LOC106565103 other upstream 1011603 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1325420 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1666786 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1918796 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2071017 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2153384 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2368708 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3893651 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3912580 56015577 ~ 56016613 (+)

Expression


Co-expression Network