G1461292


Basic Information

Item Value
gene id G1461292
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52109215 ~ 52109575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671760
tcactgtagtatttttgcagactttagcaaaaacactacaataaatactatagtatttataccatattATAAACTGcgggttcaagccctgaatgctgattggctgaaagccgtggtgtAGCAcggttatgacaaaacatttgttactGCTCTAATGATGTTGGTAACCAgtgtataatagcaataaggcacaccccctcgtgccttgtTGCTAAAATATAGAgtatagtattttttcatgtggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671760 True 245 lncRNA 0.37 2 52109215 52109575

Neighbor

gene id symbol gene type direction distance location
csf1 csf1 coding upstream 468803 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 1046454 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1211771 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1248117 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 1268811 50837015 ~ 50840404 (+)
LOC110494060 LOC106565094 coding downstream 81024 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 164679 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 181651 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 232482 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 254520 52364095 ~ 52368350 (+)
G1461181 NA non-coding upstream 6218 52102492 ~ 52102997 (+)
G1461178 NA non-coding upstream 13813 52046698 ~ 52095402 (+)
G1461227 NA non-coding upstream 115388 51993048 ~ 51993827 (+)
G1461152 NA non-coding upstream 220371 51884237 ~ 51888844 (+)
G1461150 LOC106565097 non-coding upstream 232832 51874368 ~ 51876383 (+)
G1461175 NA non-coding downstream 2148 52111723 ~ 52113123 (+)
G1461299 NA non-coding downstream 17240 52126815 ~ 52127051 (+)
G1461302 NA non-coding downstream 21018 52130593 ~ 52130810 (+)
G1461331 NA non-coding downstream 67164 52176739 ~ 52176958 (+)
G1461440 NA non-coding downstream 295766 52405341 ~ 52405572 (+)
G1460249 LOC106565103 other upstream 1018326 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1332143 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1673509 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1925519 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2064439 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2146806 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2362130 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3887073 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3906002 56015577 ~ 56016613 (+)

Expression


Co-expression Network