G1461175


Basic Information

Item Value
gene id G1461175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52111723 ~ 52113123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671635
TGGTGCTATATTCCTACGACCGACAAACACTTCTGGATCATGATCGGAAGCTACACACTTATCGCTCAGCCTCCCAGATCTGGAATAATACATTAGTTCCATAGTCCCTCGCACAGCAGGCTTACCTGACCGAAGGCAAAGCCGGTGATGAAgaaaacccctttggaaccccttttttctaagagtgtagtatcCTGATGGCTAATGTCCAATTGCTGGAAAATAAACTTTGAGCTCAGACAAGGCTTCAATCGCAGAGGGACATCAGGGAATGCTGTGTCTTTGTTTTTACAGACATGGCTTACGTGAAACTCACTCGACTCTGCTTTCCGACTAGATGGCGTTTCTATTTTCCGTATGGATCGTATGGTGGCTTCTGGTAAGAGTAGGGGAGGTGTATGCTTCCTCATCAACATTTCCTTGTGTAATGAAATTAAAAACATCTCGAGCTCCTGATCACAACCGACCTGGAGTTCCTGATGCTAAAATTCCAACCCCACTATATGTTGAGGGCATTCATGTGTATTAttatcacagctgtgtacataccGCCACAAGCAACCAGCAAGGTGGCACTCAGCGAACTGTACAATAACGTTAGCCTGCAAGAAACCTCTCAGGAGATTTTAGCCAAGAAAATCTTTGAAGTATCGCCAACATGTATCCTGCCTCACGAGAGGACCATGCGGGACCATCTGTATACAAACATTCATGACTCGTACAAAGCAATTCCCCGCCCCCACTTCAGCCAATAAGATCCCCGCTCTGTGTTCCTACTCCATGCCTACAAGCAGAAACTCAAGACGGagccaccaacacagagaatagTGAGGAGCTGGACAGAGGAATGAAACTCAATGCTGCAGGACTGTTTTGAGAATACTGTTTAGACGTTTTATTTTATTCATCCACCCAGAACGTATCCATTAACATTGaggaatatacactgctcaaaaaaataaagggaacactaaaatatcacatcctagatctgaatgaatgaaacatttttattaaatattttttctttacattgttgaatgtgctgacaacaaagtcacacaaaaatgatcaatggaaatcaaattcatcaacccatggaggtctggatttggagtcacactcaaaattaaagtggaaaaccacactacaggctgatccaactttgatgtaatgtccgtaaaacaagtcaaaatgaggctcagtagtgtgtgtggcctccacgtgcctgtatgacctccctacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671635 True 1247 lncRNA 0.43 2 52111723 52113123

Neighbor

gene id symbol gene type direction distance location
csf1 csf1 coding upstream 471311 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 1048962 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1214279 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1250625 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 1271319 50837015 ~ 50840404 (+)
LOC110494060 LOC106565094 coding downstream 77476 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 161131 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 178103 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 228934 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 250972 52364095 ~ 52368350 (+)
G1461292 NA non-coding upstream 2148 52109215 ~ 52109575 (+)
G1461181 NA non-coding upstream 8726 52102492 ~ 52102997 (+)
G1461178 NA non-coding upstream 16321 52046698 ~ 52095402 (+)
G1461227 NA non-coding upstream 117896 51993048 ~ 51993827 (+)
G1461152 NA non-coding upstream 222879 51884237 ~ 51888844 (+)
G1461299 NA non-coding downstream 13692 52126815 ~ 52127051 (+)
G1461302 NA non-coding downstream 17470 52130593 ~ 52130810 (+)
G1461331 NA non-coding downstream 63616 52176739 ~ 52176958 (+)
G1461440 NA non-coding downstream 292218 52405341 ~ 52405572 (+)
G1461938 NA non-coding downstream 301989 52415112 ~ 52415333 (+)
G1460249 LOC106565103 other upstream 1020834 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1334651 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1676017 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1928027 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2060891 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2143258 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2358582 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3883525 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3902454 56015577 ~ 56016613 (+)

Expression


Co-expression Network