Gene
RNA
| Item | Value |
|---|---|
| gene id | G1461299 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 52126815 ~ 52127051 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1671768 | True | 237 | lncRNA | 0.42 | 1 | 52126815 | 52127051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494059 | nfasc | coding | upstream | 4837 | 51967039 ~ 52121978 (+) |
| csf1 | csf1 | coding | upstream | 486403 | 51601433 ~ 51640412 (+) |
| apobec2a | LOC100196684 | coding | upstream | 1064054 | 51052682 ~ 51062761 (+) |
| LOC110494047 | btg2 | coding | upstream | 1229371 | 50894903 ~ 50897444 (+) |
| rbbp5 | LOC106565113 | coding | upstream | 1265717 | 50852607 ~ 50861098 (+) |
| LOC110494060 | LOC106565094 | coding | downstream | 63548 | 52190599 ~ 52273991 (+) |
| LOC110494061 | LOC106565309 | coding | downstream | 147203 | 52274254 ~ 52280244 (+) |
| LOC110494062 | LOC106565093 | coding | downstream | 164175 | 52291226 ~ 52298261 (+) |
| zc3h11a | zc3h11a | coding | downstream | 215006 | 52342057 ~ 52363993 (+) |
| LOC110494066 | LOC106565091 | coding | downstream | 237044 | 52364095 ~ 52368350 (+) |
| G1461175 | NA | non-coding | upstream | 13692 | 52111723 ~ 52113123 (+) |
| G1461292 | NA | non-coding | upstream | 17240 | 52109215 ~ 52109575 (+) |
| G1461181 | NA | non-coding | upstream | 23818 | 52102492 ~ 52102997 (+) |
| G1461178 | NA | non-coding | upstream | 31413 | 52046698 ~ 52095402 (+) |
| G1461227 | NA | non-coding | upstream | 132988 | 51993048 ~ 51993827 (+) |
| G1461302 | NA | non-coding | downstream | 3542 | 52130593 ~ 52130810 (+) |
| G1461331 | NA | non-coding | downstream | 49688 | 52176739 ~ 52176958 (+) |
| G1461440 | NA | non-coding | downstream | 278290 | 52405341 ~ 52405572 (+) |
| G1461938 | NA | non-coding | downstream | 288061 | 52415112 ~ 52415333 (+) |
| G1461948 | LOC106565086 | non-coding | downstream | 295117 | 52422168 ~ 52423010 (+) |
| G1460249 | LOC106565103 | other | upstream | 1035926 | 51080132 ~ 51137770 (+) |
| G1459769 | NA | other | upstream | 1349743 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 1691109 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 1943119 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 2046963 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 2129330 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 2344654 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 3869597 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 3888526 | 56015577 ~ 56016613 (+) |
