G1461302


Basic Information

Item Value
gene id G1461302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52130593 ~ 52130810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671771
CCATTGTCATGTCTAAATATCCATATATGCCTTGATGATACTCAAAAACATGTAGTGAGTTTTCAGCACTTGGCAgttctgttctgtgagcttgtgtggcctaccacttcacagatgagccattgttgctcctagacgtttccacttcacaataacagcacttacagttgaccagggcagctctagcaaggcagaaataaaaatgtatgaaCTAATAG

Function

NR:

description
PREDICTED: protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671771 True 218 lncRNA 0.41 1 52130593 52130810

Neighbor

gene id symbol gene type direction distance location
LOC110494059 nfasc coding upstream 8615 51967039 ~ 52121978 (+)
csf1 csf1 coding upstream 490181 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 1067832 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1233149 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1269495 50852607 ~ 50861098 (+)
LOC110494060 LOC106565094 coding downstream 59789 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 143444 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 160416 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 211247 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 233285 52364095 ~ 52368350 (+)
G1461299 NA non-coding upstream 3542 52126815 ~ 52127051 (+)
G1461175 NA non-coding upstream 17470 52111723 ~ 52113123 (+)
G1461292 NA non-coding upstream 21018 52109215 ~ 52109575 (+)
G1461181 NA non-coding upstream 27596 52102492 ~ 52102997 (+)
G1461178 NA non-coding upstream 35191 52046698 ~ 52095402 (+)
G1461331 NA non-coding downstream 45929 52176739 ~ 52176958 (+)
G1461440 NA non-coding downstream 274531 52405341 ~ 52405572 (+)
G1461938 NA non-coding downstream 284302 52415112 ~ 52415333 (+)
G1461948 LOC106565086 non-coding downstream 291358 52422168 ~ 52423010 (+)
G1462021 NA non-coding downstream 372365 52503175 ~ 52503874 (+)
G1460249 LOC106565103 other upstream 1039704 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1353521 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1694887 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1946897 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 2043204 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2125571 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2340895 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3865838 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3884767 56015577 ~ 56016613 (+)

Expression


Co-expression Network