G1461331


Basic Information

Item Value
gene id G1461331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52176739 ~ 52176958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1671801
cctttactccacataagagacgcatacaaagctctcacttgccgtccatttggcaaatctgaccataattctatcgtCCTGATTCCTTCTGAttaactaaagcaggaagtactagtgactcgctcaatacggaagtggtcagatgctatgctacaggactgtttttctagcacagacttgAATATGTTCagtgattcatccaatggcattgaggagtata

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1671801 True 220 lncRNA 0.42 1 52176739 52176958

Neighbor

gene id symbol gene type direction distance location
LOC110494059 nfasc coding upstream 54761 51967039 ~ 52121978 (+)
csf1 csf1 coding upstream 536327 51601433 ~ 51640412 (+)
apobec2a LOC100196684 coding upstream 1113978 51052682 ~ 51062761 (+)
LOC110494047 btg2 coding upstream 1279295 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 1315641 50852607 ~ 50861098 (+)
LOC110494060 LOC106565094 coding downstream 13641 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 97296 52274254 ~ 52280244 (+)
LOC110494062 LOC106565093 coding downstream 114268 52291226 ~ 52298261 (+)
zc3h11a zc3h11a coding downstream 165099 52342057 ~ 52363993 (+)
LOC110494066 LOC106565091 coding downstream 187137 52364095 ~ 52368350 (+)
G1461302 NA non-coding upstream 45929 52130593 ~ 52130810 (+)
G1461299 NA non-coding upstream 49688 52126815 ~ 52127051 (+)
G1461175 NA non-coding upstream 63616 52111723 ~ 52113123 (+)
G1461292 NA non-coding upstream 67164 52109215 ~ 52109575 (+)
G1461181 NA non-coding upstream 73742 52102492 ~ 52102997 (+)
G1461440 NA non-coding downstream 228383 52405341 ~ 52405572 (+)
G1461938 NA non-coding downstream 238154 52415112 ~ 52415333 (+)
G1461948 LOC106565086 non-coding downstream 245210 52422168 ~ 52423010 (+)
G1462021 NA non-coding downstream 326217 52503175 ~ 52503874 (+)
G1462159 NA non-coding downstream 528365 52705323 ~ 52705583 (+)
G1460249 LOC106565103 other upstream 1085850 51080132 ~ 51137770 (+)
G1459769 NA other upstream 1399667 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1741033 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 1993043 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 1997056 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 2079423 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2294747 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3819690 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3838619 56015577 ~ 56016613 (+)

Expression


Co-expression Network