G1461938


Basic Information

Item Value
gene id G1461938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52415112 ~ 52415333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1672467
ttattattggaccatgctggtaatttatgaacatttgaacctcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaacgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1672467 True 222 lncRNA 0.47 1 52415112 52415333

Neighbor

gene id symbol gene type direction distance location
LOC110494068 LOC106565087 coding upstream 12689 52398555 ~ 52402423 (+)
LOC100301636 LOC100301636 coding upstream 21974 52389226 ~ 52393138 (+)
LOC118936244 LOC100301636 coding upstream 33988 52377165 ~ 52381124 (+)
LOC110494066 LOC106565091 coding upstream 46762 52364095 ~ 52368350 (+)
zc3h11a zc3h11a coding upstream 51119 52342057 ~ 52363993 (+)
zgc:113307 LOC106565325 coding downstream 29382 52444715 ~ 52454863 (+)
LOC110494072 LOC106565326 coding downstream 78438 52493771 ~ 52499544 (+)
LOC110494073 LOC106583524 coding downstream 224289 52639622 ~ 52699632 (+)
LOC110494075 LOC106565328 coding downstream 316065 52731398 ~ 52752182 (+)
LOC110494076 NA coding downstream 394825 52810158 ~ 52974852 (+)
G1461440 NA non-coding upstream 9540 52405341 ~ 52405572 (+)
G1461331 NA non-coding upstream 238154 52176739 ~ 52176958 (+)
G1461302 NA non-coding upstream 284302 52130593 ~ 52130810 (+)
G1461299 NA non-coding upstream 288061 52126815 ~ 52127051 (+)
G1461175 NA non-coding upstream 301989 52111723 ~ 52113123 (+)
G1461948 LOC106565086 non-coding downstream 6835 52422168 ~ 52423010 (+)
G1462021 NA non-coding downstream 87842 52503175 ~ 52503874 (+)
G1462159 NA non-coding downstream 289990 52705323 ~ 52705583 (+)
G1462172 NA non-coding downstream 306947 52722280 ~ 52722667 (+)
G1462399 NA non-coding downstream 365075 52780408 ~ 52780630 (+)
G1460249 LOC106565103 other upstream 1324223 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 1517668 50894903 ~ 50897444 (+)
G1459769 NA other upstream 1638040 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 1979406 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 2231416 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 1758681 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 1841048 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 2056372 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3581315 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3600244 56015577 ~ 56016613 (+)

Expression


Co-expression Network