Gene
RNA
| Item | Value |
|---|---|
| gene id | G1461948 |
| gene name | LOC106565086 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 52422168 ~ 52423010 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1672481 | True | 551 | lncRNA | 0.57 | 2 | 52422168 | 52423010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494068 | LOC106565087 | coding | upstream | 19745 | 52398555 ~ 52402423 (+) |
| LOC100301636 | LOC100301636 | coding | upstream | 29030 | 52389226 ~ 52393138 (+) |
| LOC118936244 | LOC100301636 | coding | upstream | 41044 | 52377165 ~ 52381124 (+) |
| LOC110494066 | LOC106565091 | coding | upstream | 53818 | 52364095 ~ 52368350 (+) |
| zc3h11a | zc3h11a | coding | upstream | 58175 | 52342057 ~ 52363993 (+) |
| zgc:113307 | LOC106565325 | coding | downstream | 21705 | 52444715 ~ 52454863 (+) |
| LOC110494072 | LOC106565326 | coding | downstream | 70761 | 52493771 ~ 52499544 (+) |
| LOC110494073 | LOC106583524 | coding | downstream | 216612 | 52639622 ~ 52699632 (+) |
| LOC110494075 | LOC106565328 | coding | downstream | 308388 | 52731398 ~ 52752182 (+) |
| LOC110494076 | NA | coding | downstream | 387148 | 52810158 ~ 52974852 (+) |
| G1461938 | NA | non-coding | upstream | 6835 | 52415112 ~ 52415333 (+) |
| G1461440 | NA | non-coding | upstream | 16596 | 52405341 ~ 52405572 (+) |
| G1461331 | NA | non-coding | upstream | 245210 | 52176739 ~ 52176958 (+) |
| G1461302 | NA | non-coding | upstream | 291358 | 52130593 ~ 52130810 (+) |
| G1461299 | NA | non-coding | upstream | 295117 | 52126815 ~ 52127051 (+) |
| G1462021 | NA | non-coding | downstream | 80165 | 52503175 ~ 52503874 (+) |
| G1462159 | NA | non-coding | downstream | 282313 | 52705323 ~ 52705583 (+) |
| G1462172 | NA | non-coding | downstream | 299270 | 52722280 ~ 52722667 (+) |
| G1462399 | NA | non-coding | downstream | 357398 | 52780408 ~ 52780630 (+) |
| G1462526 | NA | non-coding | downstream | 534007 | 52957017 ~ 52957711 (+) |
| G1460249 | LOC106565103 | other | upstream | 1331279 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 1524724 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 1645096 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 1986462 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 2238472 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 1751004 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 1833371 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 2048695 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 3573638 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 3592567 | 56015577 ~ 56016613 (+) |
