G1462172


Basic Information

Item Value
gene id G1462172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52722280 ~ 52722667 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1672712
gacttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagacccacatcaaacatctccaatccaaagttaaatctagaattggcttcctatttcggaacaaagcatccttcactcatgctgccaaacatacccttgtaaaactaaccatcctaccaatcctcgacttcattgatgtcatttacaaaatagcctccaatacactactcaacaaattggatgcagtctatcacagtgcaatctgttttgtcaccaaagccccatatactacccaccattgcgacctgtacgctctcgttggctggccctcgcttcatactcgtcgccaaacccactggctccatgtcatctacaagaccctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1672712 True 388 lncRNA 0.44 1 52722280 52722667

Neighbor

gene id symbol gene type direction distance location
LOC110494073 LOC106583524 coding upstream 22648 52639622 ~ 52699632 (+)
LOC110494072 LOC106565326 coding upstream 222736 52493771 ~ 52499544 (+)
zgc:113307 LOC106565325 coding upstream 267417 52444715 ~ 52454863 (+)
LOC110494068 LOC106565087 coding upstream 319857 52398555 ~ 52402423 (+)
LOC100301636 LOC100301636 coding upstream 329142 52389226 ~ 52393138 (+)
LOC110494075 LOC106565328 coding downstream 8731 52731398 ~ 52752182 (+)
LOC110494076 NA coding downstream 87491 52810158 ~ 52974852 (+)
cfap20dc cssa12h3orf67 coding downstream 745468 53468135 ~ 53522586 (+)
LOC110494082 fam3d coding downstream 803550 53526217 ~ 53530187 (+)
LOC110494083 LOC106565334 coding downstream 808589 53531256 ~ 53542954 (+)
G1462159 NA non-coding upstream 16697 52705323 ~ 52705583 (+)
G1462021 NA non-coding upstream 218406 52503175 ~ 52503874 (+)
G1461948 LOC106565086 non-coding upstream 299270 52422168 ~ 52423010 (+)
G1461938 NA non-coding upstream 306947 52415112 ~ 52415333 (+)
G1461440 NA non-coding upstream 316708 52405341 ~ 52405572 (+)
G1462399 NA non-coding downstream 57741 52780408 ~ 52780630 (+)
G1462526 NA non-coding downstream 234350 52957017 ~ 52957711 (+)
G1462527 NA non-coding downstream 237637 52960304 ~ 52966563 (+)
G1462765 NA non-coding downstream 559147 53281814 ~ 53317652 (+)
G1462923 NA non-coding downstream 807768 53530435 ~ 53530686 (+)
G1460249 LOC106565103 other upstream 1631391 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 1824836 50894903 ~ 50897444 (+)
G1459769 NA other upstream 1945208 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 2286574 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 2538584 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 1451347 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 1533714 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 1749038 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3273981 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3292910 56015577 ~ 56016613 (+)

Expression


Co-expression Network