Gene
RNA
| Item | Value |
|---|---|
| gene id | G1462399 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 52780408 ~ 52780630 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative nuclease HARBI1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1672949 | True | 223 | lncRNA | 0.45 | 1 | 52780408 | 52780630 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494075 | LOC106565328 | coding | upstream | 28226 | 52731398 ~ 52752182 (+) |
| LOC110494073 | LOC106583524 | coding | upstream | 80776 | 52639622 ~ 52699632 (+) |
| LOC110494072 | LOC106565326 | coding | upstream | 280864 | 52493771 ~ 52499544 (+) |
| zgc:113307 | LOC106565325 | coding | upstream | 325545 | 52444715 ~ 52454863 (+) |
| LOC110494068 | LOC106565087 | coding | upstream | 377985 | 52398555 ~ 52402423 (+) |
| LOC110494076 | NA | coding | downstream | 29528 | 52810158 ~ 52974852 (+) |
| cfap20dc | cssa12h3orf67 | coding | downstream | 687505 | 53468135 ~ 53522586 (+) |
| LOC110494082 | fam3d | coding | downstream | 745587 | 53526217 ~ 53530187 (+) |
| LOC110494083 | LOC106565334 | coding | downstream | 750626 | 53531256 ~ 53542954 (+) |
| pb1 | pb1 | coding | downstream | 840119 | 53620749 ~ 53625211 (+) |
| G1462172 | NA | non-coding | upstream | 57741 | 52722280 ~ 52722667 (+) |
| G1462159 | NA | non-coding | upstream | 74825 | 52705323 ~ 52705583 (+) |
| G1462021 | NA | non-coding | upstream | 276534 | 52503175 ~ 52503874 (+) |
| G1461948 | LOC106565086 | non-coding | upstream | 357398 | 52422168 ~ 52423010 (+) |
| G1461938 | NA | non-coding | upstream | 365075 | 52415112 ~ 52415333 (+) |
| G1462526 | NA | non-coding | downstream | 176387 | 52957017 ~ 52957711 (+) |
| G1462527 | NA | non-coding | downstream | 179674 | 52960304 ~ 52966563 (+) |
| G1462765 | NA | non-coding | downstream | 501184 | 53281814 ~ 53317652 (+) |
| G1462923 | NA | non-coding | downstream | 749805 | 53530435 ~ 53530686 (+) |
| G1462930 | NA | non-coding | downstream | 762621 | 53543251 ~ 53545720 (+) |
| G1460249 | LOC106565103 | other | upstream | 1689519 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 1882964 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 2003336 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 2344702 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 2596712 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 1393384 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 1475751 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 1691075 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 3216018 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 3234947 | 56015577 ~ 56016613 (+) |
