Gene
RNA
| Item | Value |
|---|---|
| gene id | G1462923 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 53530435 ~ 53530686 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1673498 | True | 252 | lncRNA | 0.42 | 1 | 53530435 | 53530686 |
53,527,600
53,528,000
53,528,400
53,528,800
53,529,200
53,529,600
53,529,600
53,530,000
53,530,400
53,530,800
53,531,200
53,531,600
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494082 | fam3d | coding | upstream | 248 | 53526217 ~ 53530187 (+) |
| cfap20dc | cssa12h3orf67 | coding | upstream | 7849 | 53468135 ~ 53522586 (+) |
| LOC110494076 | NA | coding | upstream | 555583 | 52810158 ~ 52974852 (+) |
| LOC110494075 | LOC106565328 | coding | upstream | 778253 | 52731398 ~ 52752182 (+) |
| LOC110494073 | LOC106583524 | coding | upstream | 830803 | 52639622 ~ 52699632 (+) |
| LOC110494083 | LOC106565334 | coding | downstream | 570 | 53531256 ~ 53542954 (+) |
| pb1 | pb1 | coding | downstream | 90063 | 53620749 ~ 53625211 (+) |
| LOC110494086 | LOC106565337 | coding | downstream | 139623 | 53670309 ~ 53678165 (+) |
| si:dkey-7k24.5 | LOC106565339 | coding | downstream | 155474 | 53686160 ~ 53696488 (+) |
| LOC110493210 | LOC106565341 | coding | downstream | 263332 | 53794018 ~ 53861136 (+) |
| G1462765 | NA | non-coding | upstream | 212783 | 53281814 ~ 53317652 (+) |
| G1462527 | NA | non-coding | upstream | 563872 | 52960304 ~ 52966563 (+) |
| G1462526 | NA | non-coding | upstream | 572724 | 52957017 ~ 52957711 (+) |
| G1462399 | NA | non-coding | upstream | 749805 | 52780408 ~ 52780630 (+) |
| G1462172 | NA | non-coding | upstream | 807768 | 52722280 ~ 52722667 (+) |
| G1462930 | NA | non-coding | downstream | 12565 | 53543251 ~ 53545720 (+) |
| G1463860 | NA | non-coding | downstream | 339345 | 53870031 ~ 53870400 (+) |
| G1463864 | NA | non-coding | downstream | 342220 | 53872906 ~ 53873220 (+) |
| G1463865 | NA | non-coding | downstream | 342735 | 53873421 ~ 53873736 (+) |
| G1463871 | NA | non-coding | downstream | 347950 | 53878636 ~ 53878908 (+) |
| G1460249 | LOC106565103 | other | upstream | 2439546 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 2632991 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 2753363 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 3094729 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 3346739 | 50181045 ~ 50192699 (+) |
| G1464092 | LOC106565344 | other | downstream | 643328 | 54147039 ~ 54189617 (+) |
| LOC110494100 | LOC106565348 | other | downstream | 725695 | 54256327 ~ 54264616 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 941019 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 2465962 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 2484891 | 56015577 ~ 56016613 (+) |
