G1464092 (LOC106565344)


Basic Information

Item Value
gene id G1464092
gene name LOC106565344
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 54147039 ~ 54189617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1674770
CAGTGGTCAAGCAAGCTGGAGTTCCTCCTGGCTGTGGCCGGACAGATCATAGGCTTGGGGAATGTATGGAGGTTCCCATATCTGTGCTACAAAAATGGAGGAGGGGTGTTCTTCATCCCTTATGTGCTCTTTCTGTTCACCTGTGGCATTCCACTCTTTCTCCTGGAGACCTCCTTGGGCCAGTACACCACGCAGGGCAGCATCACCTGCTGGAGGAAGATCTGCCCCTTGTTTGAAGGACTGGGTTATGGTAGTCAGGTGGTAGTTCTATATTCCAGCATCTATTACATCATCATTCTAGCCTGGGCCTTCTTCTACCTCTTCTCCTCATTCAGCTCTGAGCTCCCCTGGgccagttgtagaaacagctgGAACACAGCAACCTGCATGGAGTTTGACAGAAGAGTAGTGGGACATCTAAATTGGACAGTAG
>TU1674769
CATGGGTTCACTCATGGTTAGTTCTGGGAAGGGCATTTGACAGGGAGAAACACAGGGTCTAGGTTTGCTTCCAATGAAAGGGACCAGAACAAGTATTCCTTAATGGAGAAGTAGACTACTACAACAGACTTCAGAACTACAACTTCATCCTTaagTGTTATGGAAAAGCATAATGATCCCAATTTGAGGTTCAATATGCTTTCCCAGCAGGAGATGGGTCTGGTCCATCCTGTCCCTGTGCCAAGCACCCAGACCAGGGGTCAGTGGTCAAGCAAGCTGGAGTTCCTCCTGGCTGTGGCCGGACAGATCATAGGCTTGGGGAATGTATGGAGGTTCCCATATCTGTGCTACAAAAATGGAGGAGGGGTGTTCTTCATCCCTTATGTGCTCTTTCTGTTCACCTGTGGCATTCCACTCTTTCTCCTGGAGACCTCCTTGGGCCAGTACACCACGCAGGGCAGCATCACCTGCTGGAGGAAGATCTGCCCCCTGTTTGAAGGACTGGGTTATGGTAGTCAGGTGGTAGTTCTATATTCCAGCATCTATTACATCATCATTCTAGCCTGGGCCTTCTTCTACCTCTTCTCCTCATTCAGCTCTGAGCTCCCCTGGgccagttgtagaaacagctgGAACACAGCAACCTGCATGGAGTTTGACAGAAGAGTAGTGGGACATCTAAATTGGACAGTAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1674770 False 433 lncRNA 0.51 4 54147039 54189617
TU1674769 True 694 TUCP 0.49 5 54174014 54189617

Neighbor

gene id symbol gene type direction distance location
LOC110494093 LOC106565344 coding upstream 56959 54052983 ~ 54090080 (+)
LOC110493211 LOC106565499 coding upstream 103202 54029024 ~ 54043837 (+)
LOC110494090 LOC106565498 coding upstream 169927 53969497 ~ 53977112 (+)
LOC110493210 LOC106565341 coding upstream 285903 53794018 ~ 53861136 (+)
si:dkey-7k24.5 LOC106565339 coding upstream 450551 53686160 ~ 53696488 (+)
LOC110494100 LOC106565348 coding downstream 66710 54256327 ~ 54264616 (+)
LOC110494098 rab37 coding downstream 75799 54265416 ~ 54276020 (+)
LOC110493213 NA coding downstream 112845 54302462 ~ 54316540 (+)
LOC110493214 NA coding downstream 128112 54317729 ~ 54318723 (+)
slc2a11a gtr11 coding downstream 161228 54350845 ~ 54361786 (+)
G1464065 NA non-coding upstream 129228 54017155 ~ 54017811 (+)
G1463968 NA non-coding upstream 178149 53967576 ~ 53968890 (+)
G1463949 NA non-coding upstream 205509 53941328 ~ 53941530 (+)
G1463899 NA non-coding upstream 249773 53896990 ~ 53897266 (+)
G1463887 NA non-coding upstream 256200 53890285 ~ 53890839 (+)
G1464160 NA non-coding downstream 6190 54195807 ~ 54242305 (+)
G1464094 NA non-coding downstream 23249 54212866 ~ 54226850 (+)
G1464184 NA non-coding downstream 61423 54251040 ~ 54251278 (+)
G1464223 NA non-coding downstream 140641 54330258 ~ 54332025 (+)
G1464252 NA non-coding downstream 205701 54395318 ~ 54396302 (+)
G1460249 LOC106565103 other upstream 3056150 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 3249595 50894903 ~ 50897444 (+)
G1459769 NA other upstream 3369967 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 3711333 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 3963343 50181045 ~ 50192699 (+)
LOC110494110 LOC106565356 other downstream 282088 54471705 ~ 54474472 (+)
G1466124 NA other downstream 1807031 55996648 ~ 55998347 (+)
G1466131 NA other downstream 1825960 56015577 ~ 56016613 (+)
LOC110494143 LOC106565389 other downstream 1898561 56088149 ~ 56127481 (+)
LOC110494094 LOC106565344 coding upstream 8699 54124425 ~ 54165315 (+)

Expression


Co-expression Network