Gene
RNA
| Item | Value |
|---|---|
| gene id | G1464093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 54166231 ~ 54203457 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1674772 | True | 1004 | lncRNA | 0.37 | 2 | 54166231 | 54203457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494094 | LOC106565344 | coding | upstream | 916 | 54124425 ~ 54165315 (+) |
| LOC110494093 | LOC106565344 | coding | upstream | 76151 | 54052983 ~ 54090080 (+) |
| LOC110493211 | LOC106565499 | coding | upstream | 122394 | 54029024 ~ 54043837 (+) |
| LOC110494090 | LOC106565498 | coding | upstream | 189119 | 53969497 ~ 53977112 (+) |
| LOC110493210 | LOC106565341 | coding | upstream | 305095 | 53794018 ~ 53861136 (+) |
| LOC110494100 | LOC106565348 | coding | downstream | 52870 | 54256327 ~ 54264616 (+) |
| LOC110494098 | rab37 | coding | downstream | 61959 | 54265416 ~ 54276020 (+) |
| LOC110493213 | NA | coding | downstream | 99005 | 54302462 ~ 54316540 (+) |
| LOC110493214 | NA | coding | downstream | 114272 | 54317729 ~ 54318723 (+) |
| slc2a11a | gtr11 | coding | downstream | 147388 | 54350845 ~ 54361786 (+) |
| G1464065 | NA | non-coding | upstream | 148420 | 54017155 ~ 54017811 (+) |
| G1463968 | NA | non-coding | upstream | 197341 | 53967576 ~ 53968890 (+) |
| G1463949 | NA | non-coding | upstream | 224701 | 53941328 ~ 53941530 (+) |
| G1463899 | NA | non-coding | upstream | 268965 | 53896990 ~ 53897266 (+) |
| G1463887 | NA | non-coding | upstream | 275392 | 53890285 ~ 53890839 (+) |
| G1464094 | NA | non-coding | downstream | 9409 | 54212866 ~ 54226850 (+) |
| G1464184 | NA | non-coding | downstream | 47583 | 54251040 ~ 54251278 (+) |
| G1464223 | NA | non-coding | downstream | 126801 | 54330258 ~ 54332025 (+) |
| G1464252 | NA | non-coding | downstream | 191861 | 54395318 ~ 54396302 (+) |
| G1464256 | NA | non-coding | downstream | 207783 | 54411240 ~ 54411465 (+) |
| G1460249 | LOC106565103 | other | upstream | 3075342 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 3268787 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 3389159 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 3730525 | 50427145 ~ 50437612 (+) |
| LOC110494957 | qrich1 | other | upstream | 3982535 | 50181045 ~ 50192699 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 268248 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 1793191 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 1812120 | 56015577 ~ 56016613 (+) |
| LOC110494143 | LOC106565389 | other | downstream | 1884721 | 56088149 ~ 56127481 (+) |
