G1464265


Basic Information

Item Value
gene id G1464265
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 54422204 ~ 54422623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1674957
TGGTCAAGGTGCTCCCACAGGCGACTGTGTTGGCCACTCCATtatatagacagaataccagctgactgcttcttacCCAAATagttattgtcctgttgtaggaggaaattggctccaattaagcgccgaccacagggtatggcatggcttTGCAAAATGGAGTGCTAGACTTCCTTCAAGATCACTTTTATCCTGTACAAATCttccactttaccaccaccaaagcaccccaagaccatcacattgcctccaccatgcttgacagatggtgtTAAGCACTCCGCCAGCATCTTTAAAATAATTtatgcgtctcacgaatgttctttgtgatctgaacaccttaaacgtctgtccataacacgttctctcaatcttcctctgtccCGTGTGTGTTCCTTTGCCTATCTTAAtcgtttattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1674957 True 420 lncRNA 0.45 1 54422204 54422623

Neighbor

gene id symbol gene type direction distance location
LOC110494103 LOC106565350 coding upstream 38058 54363186 ~ 54384146 (+)
slc2a11a gtr11 coding upstream 60418 54350845 ~ 54361786 (+)
LOC110493214 NA coding upstream 103481 54317729 ~ 54318723 (+)
LOC110493213 NA coding upstream 105664 54302462 ~ 54316540 (+)
LOC110494098 rab37 coding upstream 146184 54265416 ~ 54276020 (+)
LOC118940476 NA coding downstream 3762 54426385 ~ 54434260 (+)
zgc:172271 LOC106565354 coding downstream 11738 54434361 ~ 54453753 (+)
sirt4 sirt4 coding downstream 30730 54453353 ~ 54461322 (+)
LOC110494110 LOC106565356 coding downstream 49336 54471705 ~ 54474472 (+)
frs3 LOC106565358 coding downstream 64437 54487060 ~ 54500326 (+)
G1464262 NA non-coding upstream 383 54421530 ~ 54421821 (+)
G1464263 NA non-coding upstream 1433 54420570 ~ 54420771 (+)
G1464264 NA non-coding upstream 2804 54419183 ~ 54419400 (+)
G1464261 LOC100196839 non-coding upstream 3808 54418130 ~ 54418396 (+)
G1464256 NA non-coding upstream 10739 54411240 ~ 54411465 (+)
G1464280 NA non-coding downstream 10934 54433557 ~ 54435032 (+)
G1464283 NA non-coding downstream 15028 54437651 ~ 54437938 (+)
G1464609 NA non-coding downstream 143162 54565785 ~ 54566048 (+)
LOC110494100 LOC106565348 other upstream 157588 54256327 ~ 54264616 (+)
G1464092 LOC106565344 other upstream 232587 54147039 ~ 54189617 (+)
G1460249 LOC106565103 other upstream 3331315 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 3524760 50894903 ~ 50897444 (+)
G1459769 NA other upstream 3645132 50776529 ~ 50777072 (+)
G1466124 NA other downstream 1574025 55996648 ~ 55998347 (+)
G1466131 NA other downstream 1592954 56015577 ~ 56016613 (+)
LOC110494143 LOC106565389 other downstream 1665555 56088149 ~ 56127481 (+)
G1466224 gem other downstream 1796619 56219242 ~ 56220946 (+)

Expression


Co-expression Network