G1464567


Basic Information

Item Value
gene id G1464567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 54496832 ~ 54502760 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1675296
gccacctacttgatgatagctttgcacactattggcattctctcaaccagcttcacctagaatgcttttccaatagtcttgaaggagttcccacatatgctcagcacttgttggctgcttttccttcactctgcggtctaactcatcccaaaacatctcaattgggttgagttagaccaaattatagtcccactaagcgcaaaccaaatggaattgtgtatcgctgcagaatgctgtggtaaccatgctggttaagtgtgccttgacttctaaataaatcactgacagtgtcaccagcaaagcacccccacaccatcacacctcctcctccaagcttcatggtgggaacgacacatgcagagatcatccattcacctactctcacaaagacacagcgctTGGAACCAAAGTCTCAAATTTGTACTTATCAGACAAAAGGTCAGATTTCATTGCTCATGATTCTTGGCCCAAACAactctcttcttattattagttTCCTTTACAGCAATTTGAtcacgcaatctcctctgaacaatcaatgttgaaatgtgtctgttacttgaactctatgaagcatttatttgggatggaatttctgaggctggtatctcTGATAAACTCACtatctgcagcagagataactctgggtcttcctttcctgtggcggtccacatgagaggcagtttcatcatagtgcttgatggtttttgcaactgcacttgaagaaactttcaaagttcttgagattttccagattgactgaccttcatgtcttaaagtaatgatggactgtcatttatctttgtttatttgagctgttcttaccataatatggactgggtcttttaccaaatagggctaacttctgtatatcatcctaccttgtcacaacacaactgactggctcaagcacattaagaaggaaagaaattccacaaatgaacttttaacaagacacatctgttaattgaaattaattccaggtgactacctcatgaagatggttgagagaattccaatagtgtgcaaagctatcatcaaggcaaaaagtatctactttgaagaagatattttgatttgtttaacacttttttggggggatacaatttcaaagttttgatgtcttcactattactctacaatgtagaaaataaaataaaaaaaggaaaacccttgaatgagtaggtgtgtccaaactttttactggtactgtatgtatatatatatatatatacatacacacacagacacacacacacacagacacacacacacacacacacacacacacacacacacacatacatacagagagatacaTACTTACAAGAAATACAAATATACGTAGAAGAAACTCAGATTGCAAATTCTTTAAATTTAGACAACACTTCTGACCACTCACCTTTTTTCCCCCCAGCAAGGATAGAAACATTAAGCATAGTTGCCCTTCGTCTATATAGTCTCTCTTTGCTTATTACATTCATACCGAAGGTAAAACCAAGACCAGAGGGTGAGAGAGTCATTGGCATCTCTCAGGGAGAGTCCTATAGAGTTCCTAGTGAATCTCAGCCAGGTGTGTCCCTGGCCTGTCGTCAAAGTCATAGTACTAAACCACATTTGGCACTCAGTCAAATATTAGTGTACATCACAGTCATTTGCTTTGGCCTACCCAACCTTTATATCAACCAATCAACACATATTATTATCACCATTAACATACAGGTTCAACAGGTTTCAATTGCTCTGGCCTTATTGGACTAGAAGAGCATTAGCTCAGCATGTGATTGAATGAAAATAATGGACCCCTGTCTGCATCATCGTCACCCACCAGTGGATATTACACATGCATTCAatggtaaataaataaacaaatggacaaacaaacaaaaacattttgaaatacaGTACCAAATCACTGTAACATTCCTTAGATTTTGAGCTACTTTGTTTGTACCTTGGTAATATTATGGAACTAAGTGCATTTTGGACCTAGAGTGGCATTTTGAGGGGCTGTGGAAGGAAAATGACTTATTTTCTCATCATCCCGAGCATTGTAGCAAGCATCGCCACCTTGTGGTGGTCAGGCAGTTGTGATGAAATTACATAAAAGAGTAAAAAACTGTTTGTTTGAATTCAATTCTGGTCAGACTTTATTTTAAGATACACATATTAGCCACTAATTTGTAGTTTATAAGTGTGTATGTACGTAGCTCATAAGGCCTTTATTGTGTCTTATTAGCTATACATTAGGCCTCAATTAAGTGGTTTATTATTTAAACCGGACAATCCTTCATTGTTAATATTTTCTCACTTTTCAAAGGAAAATCAAAATGACAACATTGATATGACAAGATACGGCTCCCAAAAAGTCATTTCTGGACAATATTTCTGGTAACACTTTAGTATAAGGAACACATTTTAAGGTACTATTCCTGTGTACCTTTACAATTAAGTGTCACCAAATTGATAACAATGACTGACTAATGAATATACAGACTGTCAAACCATTAGAAACAGTCCGAACCACTGTATCAGTGCAAACACAGTACACAGAGATATTTGCCGTATGCCTTCTGACACCTAACCTGGCCCTTTAAAAGGCTTCGACATTCGAAAGCCACACGCTGTCCAGAAAGCTTGGCAACAGTCACTTATGGCACAATTAAGTCAGGTGTTGAATAAGCGCAAATTTGCTGTATAAGACAATCAAGAAAAcagaaacatacattttttttcacgTTCTAATCTAAGCATGTATACAATATCAAAGTTATAATATTGTCAACAGGGGGCCTGAGAGAGGTCTTAGTTCCAATGCTGATTCACATAAAAACAGGGGATCAAATACAACAGACCTGTGGAACCATTAACAACGCACCTCGAACCTCACACACATTGGTCTGAATAAACCTCATCTCCAACAATACATCTCTATTAAACCATTATTGCGAAATGTAAACACCCTTTAAATGTATCACGAAAATATATGTGTGCAAACGGATATATCCCTGTCTGAAAAATGTCTACAAACAGTGAGTAGACCTACGTATATCTTTCCATCAGATTAAATAAGCAGTTATGAGGATTACAGTTGCTAGGCCTGTGCTGCACCTTCAGCCACATTACTTCAGATTAGACAGCCAGATTGTAATGAAAACAAGGTTTGGTATGTGGATTGATCACACCAATCCAAGAGAAATAAGAAATAGAAATGAGAAATGAAAACTGATTTGaattaaaacacattttcatactggtagCCCTGATGCAGTGATCTTGAGTGAATACGAAAATGGTAGTTCCACTTACTAAACAATATGGGAAACAATCCTGCATAGCCACTACCATCCCTACCTCCTCTTACTGTCTGAACTTCTACCTTATAGCAGCATAAAACCACTGGAGTTGTGAAGACTAGAAAGATATAACGAATCCGTTGTCTCACTCCGATATGGCTGTCAATGTATAGCCTAGCCTATGAGGTGAAATGTGTCTTTCTTGCCCTTCCTTGTCCAGTTGACCTGGGTCAGCTAGACAGATTCATGAGGAGGAGTACAAAGGGTTAACAATATATAAACCCTGACCCTGTTCAGtatgtatcaagcgtctcagagtgGGAATGTTCTTGCCTTTTTCGATCATAATGAATACGATCACATGGACAGGGGAGACCTGATccgagatcagcactcctactcttgaTACATAGACCTCCAAGCTCTTCCCTTTGTTTTCGACATGTAGGCTAACTCCTTGCCTCTTAGCCCTCAGGTTTTCCATTACACATCCTAATGGCACATTGATTTGATTCATTACGTTCATACAGGTAACAGTAAAGATTTGGCACTTTAATATATTAATACAGTCTTTCTTCTTCAGAATGTAAGGTAATTAATTACAGGCATAACAATGGTATTACAATGGTGTCCCAGACAGTGTGACGATGACTGGTGATACTTTGGTCTCCAAATCACCTACTGGCTAGATTACGAAAAACTGTTTTGTCACATTTTTATGCAAAACAATCACCATATAGACATctcaatgaataaataaataaatacatatcctCAGCCAAACGCTCAATGATATAAGACTTTCCATAAACAGTTAACATTAAACATACTGATATATTCCCCTTTAAAACAGACCCTCAGTTGACAACCCTCAGTTATCAATCTGATACTTACTAAAATAGTCAACCGGTCATTTTTATATGAGGTTATTATTAATATCTTTAAGCCATTATCACAGGTTATCAACTTCTtctctaaaaaaaaaatgtaagttgCTATAGGTCTCTATAATgtttcaaaaaaaataaaaaaaatacatccaTACAATATTTGGGTCTGTGTGATGACATCACCATCTCGAAGGAGTTTGTCAGATCACAACCTTTCTGTTGCTCCAGATGAGGGATTCGGAACTGTGGGGACTTCAAAGGTAAAAAAGTGCAAAGGTAACCATAGTTTAGGAATTAGATATGGATTCCTATTCAAGTGGAATGATATGGAGTCAGAGATTAATTAAATCGTCTCAATAGTTGtgtcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcggatGTTGGAAATCTATCAACACACTGACTGTTTCATGCTATCAAGGTTACTATTATTTCCATTTTAGATTCAATTTCAACATGAAAAATGTATGATATTTAATATTGGATTAAGAGAGAAAATCTATTCAACATTTTTTTTCTGCTTTGGggtcatttttttgggggggggctaaaAATATAATACTGGATAGGATGTAAGATTACAATTCCAAAGGATAATGTGCAAACTGTACTGATCTGTACTAATTCCTGAGGGCAGATAGTTATAAATAAATATCATCAACTGTCCTTTCTATCAGTCACGGGGTCAAAAAAGTGCTTGTGAGGTGAAGAATGCACATTATTATAATTCAATTGAGGGAATAACAAACTGTTTTCATGTCAGAAAATGTTCGGTCAATTTTACAATGTGGACCAGTAAACCTGAACTCAATAGGAGCCCATGTTCGTAAACGGGGAGGTCAAATAAATCAAACAACACTGAATGATAACGGAATGAGGAACCTAGCTACTTTATGATGGGCAATACTCTTACATCTAAAAATCAACCATCACTGGTCAAACACAAAGTTGGAGACCTGACTCGTCCATTCCTGCTCCCACCCTGAACCAAACCCGGGGCCTTGGCACTCAACGCAACCACCACAaagctttttaaaaaaaagaacATTGCCAAAAGGTATAACCAAAAACAACGGTAGCTTAAGGGTTTCCCCATAAACCCAGCCAACCACGACCAAGGTTTCTGCTGCTAACTCAGATAGCATCTCACCACAGTCAGAAGGTGACCCACAATAATATGGCAACTTCAAACCAATCTTGCTCCATAAAGTGGAATATGCACAGATAAGTTTTAGTTCGTTTTCTAATTAGGTACCTGTATATGATCCAGCtggccaggacaggacaggacagaacaggcaGGTGGCTGGATGAGAGTGAGGGGTCCAGTGTGCTGCTGAGTTGCCTATACCTGTCTGTCCAGCCAAGCGCTCCACCCaaacctgtttctctctctctctctctcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1675296 True 5627 lncRNA 0.38 2 54496832 54502760

Neighbor

gene id symbol gene type direction distance location
tspo LOC100136652 coding downstream 17187 54473949 ~ 54479645 (-)
tomm6 NA coding downstream 24970 54470444 ~ 54471912 (-)
LOC110494107 LOC100196839 coding downstream 70638 54411721 ~ 54426194 (-)
LOC110494106 LOC106565352 coding downstream 86296 54395259 ~ 54410536 (-)
LOC110494101 LOC106565349 coding downstream 148744 54334348 ~ 54348088 (-)
ppil1 LOC106565501 coding upstream 130322 54633082 ~ 54634382 (-)
si:ch211-157b11.14 perm1 coding upstream 173365 54676125 ~ 54690967 (-)
LOC110494135 rnf223 coding upstream 190431 54693191 ~ 54695486 (-)
c17h1orf159 cssa12h1orf159 coding upstream 195681 54698441 ~ 54704401 (-)
kbtbd12 LOC106565366 coding upstream 215223 54717983 ~ 54735939 (-)
G1464537 NA non-coding downstream 54709 54441800 ~ 54442123 (-)
G1464533 NA non-coding downstream 62320 54434189 ~ 54434512 (-)
G1464536 NA non-coding downstream 120017 54361025 ~ 54376815 (-)
G1464913 NA non-coding upstream 121613 54624373 ~ 54627502 (-)
G1464917 NA non-coding upstream 127853 54630613 ~ 54630971 (-)
G1464918 NA non-coding upstream 128884 54631644 ~ 54631879 (-)
G1464920 NA non-coding upstream 131753 54634513 ~ 54634728 (-)
G1464868 NA non-coding upstream 132318 54635078 ~ 54642804 (-)
G1464551 NA other downstream 33130 54462671 ~ 54463702 (-)
G1463760 NA other downstream 716336 53778482 ~ 53780496 (-)
G1462356 NA other downstream 1792144 52704133 ~ 52704688 (-)
G1461521 NA other downstream 2735810 51746916 ~ 51761022 (-)
LOC110494054 LOC106565105 other downstream 3419515 51063244 ~ 51077345 (-)
G1464933 NA other upstream 169492 54672252 ~ 54673919 (-)
G1464950 ccdc36 other upstream 213344 54716104 ~ 54717490 (-)
G1464954 NA other upstream 224036 54726796 ~ 54727895 (-)
LOC110494137 LOC106565384 other upstream 1451713 55954473 ~ 55971001 (-)
dnai1.2 dnai1 other upstream 1660100 56130667 ~ 56167366 (-)

Expression

G1464567 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G1464567 Expression in each Bioproject

Bar chart with 21 bars.
G1464567 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network