Item | Value |
---|---|
gene id | G1464641 |
gene name | LOC106565501 |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 54633094 ~ 54633537 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: peptidyl-prolyl cis-trans isomerase-like 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1675373 | True | 351 | lncRNA | 0.47 | 2 | 54633094 | 54633537 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
slc6a11a | LOC106565359 | coding | upstream | 10418 | 54592555 ~ 54622676 (+) |
frs3 | LOC106565358 | coding | upstream | 132768 | 54487060 ~ 54500326 (+) |
LOC110494110 | LOC106565356 | coding | upstream | 159208 | 54471705 ~ 54474472 (+) |
sirt4 | sirt4 | coding | upstream | 171772 | 54453353 ~ 54461322 (+) |
zgc:172271 | LOC106565354 | coding | upstream | 179341 | 54434361 ~ 54453753 (+) |
eno1b | LOC106565361 | coding | downstream | 19895 | 54653432 ~ 54662827 (+) |
rereb | NA | coding | downstream | 29592 | 54663129 ~ 54677374 (+) |
iho1 | ccdc36 | coding | downstream | 79974 | 54713511 ~ 54717607 (+) |
slc26a6l | LOC106565505 | coding | downstream | 99526 | 54733063 ~ 54742363 (+) |
LOC110494114 | LOC106565368 | coding | downstream | 159406 | 54792943 ~ 54805426 (+) |
G1464616 | NA | non-coding | upstream | 5679 | 54624324 ~ 54627415 (+) |
G1464615 | NA | non-coding | upstream | 8886 | 54622806 ~ 54624208 (+) |
G1464609 | NA | non-coding | upstream | 67046 | 54565785 ~ 54566048 (+) |
G1464283 | NA | non-coding | upstream | 195156 | 54437651 ~ 54437938 (+) |
G1464659 | rnf223 | non-coding | downstream | 57641 | 54691178 ~ 54694992 (+) |
G1464668 | NA | non-coding | downstream | 73433 | 54706970 ~ 54707336 (+) |
G1465118 | NA | non-coding | downstream | 355502 | 54989039 ~ 54989364 (+) |
G1465120 | LOC100136012 | non-coding | downstream | 356388 | 54989925 ~ 54990146 (+) |
G1465162 | NA | non-coding | downstream | 383300 | 55016837 ~ 55017440 (+) |
LOC110494100 | LOC106565348 | other | upstream | 368478 | 54256327 ~ 54264616 (+) |
G1464092 | LOC106565344 | other | upstream | 443477 | 54147039 ~ 54189617 (+) |
G1460249 | LOC106565103 | other | upstream | 3542205 | 51080132 ~ 51137770 (+) |
LOC110494047 | btg2 | other | upstream | 3735650 | 50894903 ~ 50897444 (+) |
G1466124 | NA | other | downstream | 1363111 | 55996648 ~ 55998347 (+) |
G1466131 | NA | other | downstream | 1382040 | 56015577 ~ 56016613 (+) |
LOC110494143 | LOC106565389 | other | downstream | 1454641 | 56088149 ~ 56127481 (+) |
G1466224 | gem | other | downstream | 1585705 | 56219242 ~ 56220946 (+) |
LOC110494160 | LOC105017078 | other | downstream | 1946854 | 56575737 ~ 56584088 (+) |