G1465162


Basic Information

Item Value
gene id G1465162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 55016837 ~ 55017440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1675946
gtttctttcagctggagaaagacgacaagagtagaaggcgcagggatggagtttaccgtcagtggagctacgctgggacaggatggcgcccacccccacatcagacgcatccacctccacaacgaactgacgggaagtgtcaggttgagagagaatcggggcgttggtgaatcggctcttcaaatctagaaatgctcggtctgcctcaggagaccaacagaactttctggtgcaagacgtcagtacagttaaaggggcggccacccggctgtaatcacggataaacctccgataaaaatttgcaaaccccaggaatctctggagctgcaatctcgaaccgggctggacccaatcccgaaccgcccgaaccttctcttggtccatcttgatctctcccctggagatgatgtaaccgaggaaggacgtcgtgtgggcgtgaaaaatcacacttctcagccttcacgaacagacggttctccaataaccgctgcaggacctgcttgacatgttgaacgtggctagaaagctccttcgagaagatgaggatatcatccaggtaaacgaacacaaaaataccaatcatatctctcagaacgtcattcac

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1675946 True 604 lncRNA 0.52 1 55016837 55017440

Neighbor

gene id symbol gene type direction distance location
kiaa1328 LOC106565370 coding upstream 151054 54825540 ~ 54865783 (+)
LOC110493217 LOC105909373 coding upstream 192780 54818334 ~ 54824057 (+)
LOC110494114 LOC106565368 coding upstream 211411 54792943 ~ 54805426 (+)
slc26a6l LOC106565505 coding upstream 274474 54733063 ~ 54742363 (+)
iho1 ccdc36 coding upstream 299230 54713511 ~ 54717607 (+)
LOC110493220 LOC106565372 coding downstream 615767 55633207 ~ 55652540 (+)
cita LOC106565373 coding downstream 648404 55665844 ~ 55717514 (+)
LOC110494139 mlrv coding downstream 703923 55721363 ~ 55724608 (+)
LOC110493221 LOC106565375 coding downstream 712346 55729786 ~ 55784821 (+)
LOC110494133 LOC106565377 coding downstream 767587 55785027 ~ 55789929 (+)
G1465120 LOC100136012 non-coding upstream 26691 54989925 ~ 54990146 (+)
G1465118 NA non-coding upstream 27473 54989039 ~ 54989364 (+)
G1464668 NA non-coding upstream 309501 54706970 ~ 54707336 (+)
G1464659 rnf223 non-coding upstream 321845 54691178 ~ 54694992 (+)
G1464641 LOC106565501 non-coding upstream 383300 54633094 ~ 54633537 (+)
G1465176 NA non-coding downstream 10187 55027627 ~ 55027914 (+)
G1465224 NA non-coding downstream 45311 55062751 ~ 55062966 (+)
G1465242 NA non-coding downstream 59018 55076458 ~ 55076727 (+)
G1465770 NA non-coding downstream 459852 55477292 ~ 55477585 (+)
G1465833 NA non-coding downstream 504463 55521903 ~ 55522140 (+)
LOC110494110 LOC106565356 other upstream 542365 54471705 ~ 54474472 (+)
LOC110494100 LOC106565348 other upstream 752221 54256327 ~ 54264616 (+)
G1464092 LOC106565344 other upstream 827220 54147039 ~ 54189617 (+)
G1460249 LOC106565103 other upstream 3925948 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 4119393 50894903 ~ 50897444 (+)
G1466124 NA other downstream 979208 55996648 ~ 55998347 (+)
G1466131 NA other downstream 998137 56015577 ~ 56016613 (+)
LOC110494143 LOC106565389 other downstream 1070738 56088149 ~ 56127481 (+)
G1466224 gem other downstream 1201802 56219242 ~ 56220946 (+)
LOC110494160 LOC105017078 other downstream 1562951 56575737 ~ 56584088 (+)

Expression


Co-expression Network