G1465176


Basic Information

Item Value
gene id G1465176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 55027627 ~ 55027914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1675960
agttgtgggtgaacaaggaatacaggagagggatgagaatgcaccgttgtggggccccagtgttgaggatcagcggagtggaaatgttgtttcctaccttcaccacctggggcgacccgtcaggaagtccagggcggagttgcacagggtggggttgagacccagggtctcaagcttaatgatgagtttggagggtactatggtgttgaatactgagctgtagtcaatgaacagcattcttacataggtattcctcttgtccagatgggatagggaagtgtgcagtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1675960 True 288 lncRNA 0.51 1 55027627 55027914

Neighbor

gene id symbol gene type direction distance location
kiaa1328 LOC106565370 coding upstream 161844 54825540 ~ 54865783 (+)
LOC110493217 LOC105909373 coding upstream 203570 54818334 ~ 54824057 (+)
LOC110494114 LOC106565368 coding upstream 222201 54792943 ~ 54805426 (+)
slc26a6l LOC106565505 coding upstream 285264 54733063 ~ 54742363 (+)
iho1 ccdc36 coding upstream 310020 54713511 ~ 54717607 (+)
LOC110493220 LOC106565372 coding downstream 605293 55633207 ~ 55652540 (+)
cita LOC106565373 coding downstream 637930 55665844 ~ 55717514 (+)
LOC110494139 mlrv coding downstream 693449 55721363 ~ 55724608 (+)
LOC110493221 LOC106565375 coding downstream 701872 55729786 ~ 55784821 (+)
LOC110494133 LOC106565377 coding downstream 757113 55785027 ~ 55789929 (+)
G1465162 NA non-coding upstream 10187 55016837 ~ 55017440 (+)
G1465120 LOC100136012 non-coding upstream 37481 54989925 ~ 54990146 (+)
G1465118 NA non-coding upstream 38263 54989039 ~ 54989364 (+)
G1464668 NA non-coding upstream 320291 54706970 ~ 54707336 (+)
G1464659 rnf223 non-coding upstream 332635 54691178 ~ 54694992 (+)
G1465224 NA non-coding downstream 34837 55062751 ~ 55062966 (+)
G1465242 NA non-coding downstream 48544 55076458 ~ 55076727 (+)
G1465770 NA non-coding downstream 449378 55477292 ~ 55477585 (+)
G1465833 NA non-coding downstream 493989 55521903 ~ 55522140 (+)
G1465866 NA non-coding downstream 522007 55549921 ~ 55550254 (+)
LOC110494110 LOC106565356 other upstream 553155 54471705 ~ 54474472 (+)
LOC110494100 LOC106565348 other upstream 763011 54256327 ~ 54264616 (+)
G1464092 LOC106565344 other upstream 838010 54147039 ~ 54189617 (+)
G1460249 LOC106565103 other upstream 3936738 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 4130183 50894903 ~ 50897444 (+)
G1466124 NA other downstream 968734 55996648 ~ 55998347 (+)
G1466131 NA other downstream 987663 56015577 ~ 56016613 (+)
LOC110494143 LOC106565389 other downstream 1060264 56088149 ~ 56127481 (+)
G1466224 gem other downstream 1191328 56219242 ~ 56220946 (+)
LOC110494160 LOC105017078 other downstream 1552477 56575737 ~ 56584088 (+)

Expression


Co-expression Network