G1466630


Basic Information

Item Value
gene id G1466630
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 56341261 ~ 56342125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1677513
attataaacttggattagctaacacaatgtgacattggaacacaggagtgatggttgctggtaatgggcctctgtacgcctatgtagacattccatacaaaaatcagctgtttccagctacaatagtcatttacaacattaacaatgtctacactgtatttctgatcaatttgatgttattttaatggacaaaaaatgtgcttttctttcaaaaacaaggacatttcaaagtaacaccaaacttttgaacggtagtgtattttttttacaactttacaTTTACTTCACTATACCtctaaagaaaatatgtactttttacttcctCACACCACTTAGAAACAAGGAGCTGAGAGTCTCTGCCTACATAGATGATTACCTGCTTTGCTCCTGATTCTGGGAACGAGTGGTACGAAACACAAATTCCCTTGTAACCCGTCTCTCCGAGCTAAGATCAATCAGAAAAAGAGCTGTTTGGTGCCAAAAGAGAGAATAGAATACCTAGGCGTGGGGCTGGCAGGGAGCATTCTCAGAGACTGCACCACTTTGTTCCGACAGTGCCGCTCCTTGTTCCACAGGGGGGCGCTCATCACGTTCAAGACGTGCCTCCGAGTGCCGGGGTTGATGGGGTCCACCATCTCAgtagtcaaatcaaattcaaatgtatttgtcacatgcttcgttgtcacgacttccaccgaagtcggttcctctccttgttcgggcgacgttcggcggtcttctagccatcgttgatccacttttcattttccatttgttttgtcttgttttcctacacacctggttctcatttccctcattaagtgttgtgtatttagccctctgttccccccatgtctttgtgtgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC107708749, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1677513 True 865 lncRNA 0.43 1 56341261 56342125

Neighbor

gene id symbol gene type direction distance location
LOC110494150 NA coding upstream 12219 56324591 ~ 56329073 (+)
zgc:109965 LOC106565507 coding upstream 138409 56192761 ~ 56202852 (+)
LOC110494146 fam219a coding upstream 148865 56170609 ~ 56192396 (+)
LOC110494144 LOC106565388 coding upstream 229176 56108382 ~ 56112085 (+)
LOC110494143 LOC106565389 coding upstream 246704 56088149 ~ 56127481 (+)
LOC110494151 LOC106565395 coding downstream 25907 56368032 ~ 56374726 (+)
LOC110494152 LOC106565396 coding downstream 104967 56447092 ~ 56452377 (+)
rbck1 ub7i3 coding downstream 119218 56461343 ~ 56473775 (+)
LOC110494158 LOC104945853 coding downstream 211380 56553505 ~ 56556106 (+)
LOC110494160 LOC105017078 coding downstream 233612 56575737 ~ 56584088 (+)
G1466625 NA non-coding upstream 19032 56322014 ~ 56322229 (+)
G1466594 NA non-coding upstream 61403 56279456 ~ 56279858 (+)
G1466592 NA non-coding upstream 62810 56278145 ~ 56278451 (+)
G1466631 NA non-coding downstream 202 56342327 ~ 56342542 (+)
G1466632 NA non-coding downstream 895 56343020 ~ 56343223 (+)
G1466702 tbc1d20 non-coding downstream 138862 56480987 ~ 56483412 (+)
G1466708 NA non-coding downstream 152729 56494854 ~ 56506137 (+)
G1466224 gem other upstream 120315 56219242 ~ 56220946 (+)
G1466131 NA other upstream 324648 56015577 ~ 56016613 (+)
G1466124 NA other upstream 343087 55996648 ~ 55998347 (+)
LOC110494110 LOC106565356 other upstream 1866789 54471705 ~ 54474472 (+)
G1467020 NA other downstream 775577 57117702 ~ 57118886 (+)
G1467030 NA other downstream 804388 57146488 ~ 57147741 (+)
G1467031 NA other downstream 807178 57149303 ~ 57150343 (+)
G1467159 LOC106565433 other downstream 1136672 57478797 ~ 57554480 (+)

Expression


Co-expression Network