G1466708


Basic Information

Item Value
gene id G1466708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 56494854 ~ 56506137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1677606
CGAGTTTAACATATTTATTcacacaaaacacatttttttagtAAGGCAACAATATATACAGACAATGATTTATATATGAATACcatacgtacagttgaagtcggaagtttacatacaccttagccaaatacatttggctaaattcctgacatttaatcctagtaaaaattccctgtcttaggtcagttaggatcaccactttattttaagattgtgaaatgtcagaataatagtagagagaatgatttatttaagcttttatttctttcatcacattcccagtgggtcagaagttcacatacactcaatttgtatttggtagcattgcctttaaattgtttaacttgggtcaaacatttcaggtagcttcccacaataagttaggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcctccttgctcgcacatgctttttcagttctgcccacacattttctataggattgtggtCATGGAgctgtgatggctactccaatactgatgccatctattttgtgaagtgcaccagtccctcttgcagcaaagcacccccacaacatgatgctcccacccctgtgcttcacggttgggatggtgttcttcggcttgcaagcctccccctttttcctccaaacataacgatggtcattattgccaacagttccatttttgtttcatcagaccagaggacatttctccaaaaagtacaatctttgtccccatgtgcagttgcaaaccgtagtctggcttttttatggaggttttggagcagtggcttcttccttgctgagcggcctttcaggttatgtcgatataggactcgttttactgtgaatatagatacttttgtactggtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcactttttgcactaaagtacgttcatctctaggagatcgAACACGTCtccctcctgagcggtatgacggctgcatggtcccatggtgtttatacttgtgtactattgttttgtgcagatgaacgtggtaccttcaggcgtttggaaatagtctacaattctttttctgaggtcttggctgaattgttttgatttccccatgatgtcaagcagagaggcactgagtttgaaggtaggccttgaaatacacccacaggtacacctccaattgactcaaatgatatcaattagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagctgttcaaaggcacagtcaacttagtgtatgtagacttctgacccactggatttgtgatacagtgaattacaagtgaaataatctgtctgtaaacaattgttggaaaaatgacctgtgtaatgcataaagtagatgtcctaactgacttgccaaaactatagtttgttaacaagaaatttgtggtgtggttgaaaaacgagttttaatgattccaacctaagtgtatgtaaacttccgacttcaactgtacatatggtATTCATATATAAATCATTGTCTATATATATTGTGTTGCCTtactaaaaaaaatgtattttgttttgtgtgaatAAATATGTTAAACTGGTATGGTATTTTTGTCCTGGAAAAGAGGGTATTGAAATGACTTTTCACACGTTTACATTATCTTCATGCAACCACGTTTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1677606 True 1703 lncRNA 0.39 2 56494854 56506137

Neighbor

gene id symbol gene type direction distance location
rbck1 ub7i3 coding upstream 21079 56461343 ~ 56473775 (+)
LOC110494152 LOC106565396 coding upstream 42477 56447092 ~ 56452377 (+)
LOC110494151 LOC106565395 coding upstream 120129 56368032 ~ 56374726 (+)
LOC110494150 NA coding upstream 165812 56324591 ~ 56329073 (+)
zgc:109965 LOC106565507 coding upstream 292002 56192761 ~ 56202852 (+)
LOC110494158 LOC104945853 coding downstream 47368 56553505 ~ 56556106 (+)
LOC110494160 LOC105017078 coding downstream 69600 56575737 ~ 56584088 (+)
LOC110494159 nrn1 coding downstream 78722 56584859 ~ 56591591 (+)
LOC110494162 LOC106565402 coding downstream 92268 56598405 ~ 56617378 (+)
LOC110494163 inpp coding downstream 116403 56622540 ~ 56629007 (+)
G1466702 tbc1d20 non-coding upstream 11442 56480987 ~ 56483412 (+)
G1466632 NA non-coding upstream 151631 56343020 ~ 56343223 (+)
G1466631 NA non-coding upstream 152312 56342327 ~ 56342542 (+)
G1466630 NA non-coding upstream 152729 56341261 ~ 56342125 (+)
G1466707 NA non-coding downstream 27531 56533668 ~ 56536745 (+)
G1466742 NA non-coding downstream 53376 56559513 ~ 56559838 (+)
G1466775 NA non-coding downstream 138377 56644514 ~ 56644724 (+)
G1466787 NA non-coding downstream 162413 56668550 ~ 56671026 (+)
G1466824 NA non-coding downstream 208418 56714555 ~ 56714779 (+)
G1466224 gem other upstream 273908 56219242 ~ 56220946 (+)
LOC110494143 LOC106565389 other upstream 367373 56088149 ~ 56127481 (+)
G1466131 NA other upstream 478241 56015577 ~ 56016613 (+)
G1466124 NA other upstream 496680 55996648 ~ 55998347 (+)
LOC110494110 LOC106565356 other upstream 2020382 54471705 ~ 54474472 (+)
G1467020 NA other downstream 611565 57117702 ~ 57118886 (+)
G1467030 NA other downstream 640376 57146488 ~ 57147741 (+)
G1467031 NA other downstream 643166 57149303 ~ 57150343 (+)
G1467159 LOC106565433 other downstream 972660 57478797 ~ 57554480 (+)

Expression


Co-expression Network