G1467030


Basic Information

Item Value
gene id G1467030
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57146488 ~ 57147741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1677992
GTGTAGCTCGCGTGCTTCCATGAATGCGTAGCGAATGGCTGAGGATAAACTACATAATCAGTCTAacaatttgtatttacaatggcagtaaatggagaggaagagagattaaTGTTCTCTGTAGATGGCGATGCATTGTTGTATTTACCGTACTGTTTGTTACATAGGCGCTTCATCTATGCCGCTATTTTGAGGAAAACACACTCAACCTGAAGGGAAAGCGCAGAGACTGGAGCGGATGTGACCTTGACAAACCTCCCCCTTGCTGCCCCTTAACTGCAAAGCAATGTCTCAGCAAACATGCCATCTTCCGGCTGGCCTTCTTATGCCCCctccgtcctctccctctcctggg
>TU1677991
GCGTAGCGAATGGCTGAGGATAAACTACATAATCAGTCTAacaatttgtatttacaatgGCATTGTTGTATTTACCGTACTGTTTGTTACATAGGCGCTTCATCTATGCCGCTATTTTGAGGAAAACACACTCAACCTGAAGGGAAAGCGCAGAGACTGGAGCGGATGTGACCTTGACAAACCTCCCCCTTGCTGCCCCTTAACTGCAAAGCAATGTCTCAGCAAACATGCCATCTTCCGGCTGGCCTTCTTATGCCCCctccgtcctctccctctcctgggtCCAGGACCAGGACAGCTTCCCTTCAAACTGGGACCCTGGTGCTGGGTGCAGATATTGTGTACCTGTCTGAGACTTACGGACACACTGGCTCACCTGAGCAAGGACAGGACTCTCATCCAAGATGCGAGGAGATCACGGGACACCTAGCTTCTACTGAGACACTCTGCCTCCGTAGAAGGTTCCATGTAGAGCTTTTGCACCGCTAACCCACACAGAACATCAACATCTACCGCGCTACTCAGAGAGGGAAGTAGTGACCACAATGAGACTGGATAGGGTTGGGAGACTGTGATGAACAGTTGAATAGGTTGAGACCTGGAGGGGAATAACACAACAGGGAATCCTCTGGTCAAGAGGGAGTCTTCTAGACATCCTCTCTGAGACAAGTACATGACTGTTACTAGTATTTTACTGCCAGAACGAACACGTATACCCTGATACATTACTATGGTCAGATAGAAAAGGAAGAACATGCACACATACAACAACTTTTTGTATGCGCTGGATACCAAAGGAGAGACTTTTGAATAGACATTAAAGAGCAACGGCTCCTCACTCAATTTAGAGTATTCCCAACTGTTATTTTACACAAATATACA
>TU1677993
GCGTAGCGAATGGCTGAGGATAAACTACATAATCAGTCTAacaatttgtatttacaatggcagtaaatggagaggaagagagattaaTGTTCTCTGTAGATGGCGATGCATTGTTGTATTTACCGTACTGTTTGTTACATAGGCGCTTCATCTATGCCGCTATTTTGAGGAAAACACACTCAACCTGAAGGGAAAGCGCAGAGACTGGAGCGGATGTGACCTTGACAAACCTCCCCCTTGCTGCCCCTTAACTGCAAAGCAATGTCTCAGCAAACATGCCATCTTCCGGCTGGCCTTCTTATGCCCCctccgtcctctccctctcctggg

Function

NR:

description
EEF1A lysine methyltransferase 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1677992 False 355 lncRNA 0.48 2 57146488 57147141
TU1677991 False 882 TUCP 0.47 3 57146513 57147741
TU1677993 True 330 lncRNA 0.47 2 57146513 57147141

Neighbor

gene id symbol gene type direction distance location
nelfcd nelfd coding upstream 34926 57105818 ~ 57111562 (+)
LOC110494185 LOC106565423 coding upstream 41310 57073921 ~ 57105178 (+)
rabif LOC106565422 coding upstream 79426 57065044 ~ 57067062 (+)
adipor1a LOC101268928 coding upstream 86037 57051596 ~ 57060451 (+)
LOC110494182 LOC106565421 coding upstream 95500 57042425 ~ 57050988 (+)
nramp-alpha nramp-alpha coding downstream 29310 57176451 ~ 57225686 (+)
LOC110494189 LOC106565429 coding downstream 91119 57238260 ~ 57274001 (+)
LOC110494190 LOC106565431 coding downstream 128136 57275277 ~ 57304551 (+)
tegt LOC100196653 coding downstream 158663 57305804 ~ 57329727 (+)
LOC110493228 LOC106583273 coding downstream 321612 57468753 ~ 57474567 (+)
G1467001 LOC106565426 non-coding upstream 29744 57113017 ~ 57116744 (+)
G1467009 NA non-coding upstream 76212 57069563 ~ 57070276 (+)
G1467007 NA non-coding upstream 78227 57067853 ~ 57068261 (+)
G1466999 NA non-coding upstream 81591 57064549 ~ 57064897 (+)
G1466998 NA non-coding upstream 82306 57063981 ~ 57064182 (+)
G1467041 NA non-coding downstream 26408 57173549 ~ 57173965 (+)
G1467054 NA non-coding downstream 47333 57194474 ~ 57212587 (+)
G1467113 NA non-coding downstream 192300 57339441 ~ 57340388 (+)
G1467121 NA non-coding downstream 201323 57348464 ~ 57349023 (+)
G1467123 NA non-coding downstream 202823 57349964 ~ 57351358 (+)
G1467020 NA other upstream 27602 57117702 ~ 57118886 (+)
LOC110494160 LOC105017078 other upstream 563767 56575737 ~ 56584088 (+)
G1466224 gem other upstream 925542 56219242 ~ 56220946 (+)
LOC110494143 LOC106565389 other upstream 1019007 56088149 ~ 56127481 (+)
G1466131 NA other upstream 1129875 56015577 ~ 56016613 (+)
G1467031 NA other downstream 2162 57149303 ~ 57150343 (+)
G1467159 LOC106565433 other downstream 331656 57478797 ~ 57554480 (+)
LOC110494206 LOC108254821 other downstream 351241 57498305 ~ 57548178 (+)
G1467219 NA other downstream 442724 57589865 ~ 57614300 (+)
G1469076 NA other downstream 1360156 58507297 ~ 58507885 (+)

Expression


Co-expression Network