G1467113


Basic Information

Item Value
gene id G1467113
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57339441 ~ 57340388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1678082
gtacaaactatggcataaggggacaacaagcagataagaggcaatccgtaatttcaattaatgagcaagctaggacagacgtagtcaatataactatttgttcagcgcTTTTGAAATGGGCTACTGACAGCTtacaacatacacttagttttactttcttagctacagtatacatatctctctGGAATATTACATAATTTAGGCAGCAGCATACACAACAcatttggactcaccttgttgtgctgttctcacttgaacaggaaggtgtcACGGGGGTCCTTCATAGGGATCATTTTGTGTCAATCTTtgtcaaagtctggcattctctggatttatggtgcttgaAAGACATCTgtgaactctgaaaaaaaacaggtggaatcatgatgacgtcagtgatcttcaggtgggaactctagaaagaggcccgagttcctgacttgcaattccgagttgaatgacccttcaaaatgtatttttccatccggtgctctttaaaaaaaaaaaatgtttttttgagttcccagttgtcttgaactcactgaagtctgagatttcccagttcaatgtttccagttgttttgagcgtggcagcatggccaatgttgaatgtttatccttttaagcttgtaAAAGAGACTCTTAAACCCAGACCACatacccactccactgaatagcaggctagtgattgccaAAATGAAtaccatatgctgcatttgctttAGAACTATTgcttacctttttgttggtgacactttgatatctgtttaaagggcaaatccacagatgaaacaataacaaatcgccctgcctctgttttggtaaaaagctgagggatgggcctggagaaatgtgaccactctcagattaatagacagagctagggatgcaaggactgaccatccataatATAAAAatggttttaaccatgttatgaggcaaaaaaaa
>TU1678084
ggatttatggtgcttgaAAGACATCTgtgaactctgaaaaaaaacaggtggaatcatgatgacgtcagtgatcttcaggtgggaactctagaaagaggcccgagttcctgacttgcaattccgagttgaatgacccttcaaaatgtatttttccatccggtgctctttaaaaaaaaaaaatgtttttttgagttcccagttgtcttgaactcactgaagtctgagatttcccagttcaatgtttccagttgttttgagcgtggcagcatggccaatgttgaatgtttatccttttaagcttgtaAAAGAGACTCTTAAACCCAGACCACatacccactccactgaatagcaggctagtgattgccaAAATGAAtaccatatgctgcatttgctttAGAACTATTgcttacctttttgttggtgacactttgatatctgtttaaagggcaaatccacagatgaaacaataacaaatcgccctgcctctgttttggtaaaaagctgagggatgggcctggagaaatgtgaccactctcagattaatagacagagctagggatgcaaggactgaccatccataatATAAAAatggttttaaccatgttatgaggcaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1678082 False 948 lncRNA 0.40 1 57339441 57340388
TU1678084 True 620 lncRNA 0.40 1 57339769 57340388

Neighbor

gene id symbol gene type direction distance location
tegt LOC100196653 coding upstream 9714 57305804 ~ 57329727 (+)
LOC110494190 LOC106565431 coding upstream 34890 57275277 ~ 57304551 (+)
LOC110494189 LOC106565429 coding upstream 65440 57238260 ~ 57274001 (+)
nramp-alpha nramp-alpha coding upstream 113755 57176451 ~ 57225686 (+)
nelfcd nelfd coding upstream 227879 57105818 ~ 57111562 (+)
LOC110493228 LOC106583273 coding downstream 128365 57468753 ~ 57474567 (+)
LOC110494206 LOC108254821 coding downstream 157917 57498305 ~ 57548178 (+)
LOC110494197 LOC106565496 coding downstream 315561 57655949 ~ 57665568 (+)
LOC110494203 LOC106565438 coding downstream 343457 57683845 ~ 57688188 (+)
LOC110494205 LOC106565438 coding downstream 353788 57694176 ~ 57697563 (+)
G1467054 NA non-coding upstream 126854 57194474 ~ 57212587 (+)
G1467041 NA non-coding upstream 165476 57173549 ~ 57173965 (+)
G1467030 NA non-coding upstream 192300 57146488 ~ 57147741 (+)
G1467001 LOC106565426 non-coding upstream 222697 57113017 ~ 57116744 (+)
G1467009 NA non-coding upstream 269165 57069563 ~ 57070276 (+)
G1467121 NA non-coding downstream 8076 57348464 ~ 57349023 (+)
G1467123 NA non-coding downstream 9576 57349964 ~ 57351358 (+)
G1467122 NA non-coding downstream 11132 57351520 ~ 57353653 (+)
G1467124 NA non-coding downstream 19001 57359389 ~ 57359636 (+)
G1467126 LOC106565432 non-coding downstream 20734 57361122 ~ 57361382 (+)
G1467031 NA other upstream 189098 57149303 ~ 57150343 (+)
G1467020 NA other upstream 220555 57117702 ~ 57118886 (+)
LOC110494160 LOC105017078 other upstream 756720 56575737 ~ 56584088 (+)
G1466224 gem other upstream 1118495 56219242 ~ 56220946 (+)
G1467159 LOC106565433 other downstream 138409 57478797 ~ 57554480 (+)
G1467219 NA other downstream 249477 57589865 ~ 57614300 (+)
G1469076 NA other downstream 1166909 58507297 ~ 58507885 (+)
G1470607 NA other downstream 2761504 60101892 ~ 60104007 (+)

Expression


Co-expression Network