G1467122


Basic Information

Item Value
gene id G1467122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57351520 ~ 57353653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1678093
CGGAAGAACTGGGACGCTTTCGACatgggctgtgcattatcatcctgaaacacattatgtgtttttttctgtgcattgaaattgccattgataaaatgcaactgtgttttttgtccgtagcttatgcctgcccataccataatcccaccatggggcactctgttgacatcagcaaaccactcgcccacgtgacaccatacacgtggtctgcggttgtgagtccggttggacgtactgacaaattctctaaaacaacattgcctatggtagagaaattaacattaaattatctgccaacagctctggtggacattcctgcagtaagcatgccaatagtatgctccctcaaaacttaagacatctgtagcattgtgttgtgtgacaaaactgcacatttaagagtgtatttttattgtccccagcacaaggtgcacatgtggaatgatcatgctgtttaatcatcttcttgatatgccacaattgtcaggtggatggattatcttggcaaaggagaaatgctcactaacagggatgtaaacatatttgaGAAATATGCGTATGCGTTTGTGCGTATGGCACATttcggggatcttttatttcagctcatgaaaacaaccctttacatgttgcgtttatatttttgttcagtgtacttatGAGGACATAATCAAGTACATgggcaggaagggagggaggagtccATGTCCTTCTTAGTGTCTCTTGGTGCTGTTCTGAACTGGGAGTTTAAACaaggggtgtgtcccaaatggatcccattccctatagtgcacttcttttgactaaagtagtgcactatatttagggaatagggtgccatttgagaagcaGTAAAGTTCCCTAATGGGCTAGGATCTCCTATCAGTTTATATTCTGTTTGCAAAAGAAGAATGAAACTGTACCAAAAAAAAGCGATAGGTGTTTAGCCACAGACAGGGTTGCCACAACCTGAAACGACCCACAGTtgaacataaaaaaaacatgtttttggcaGCCAGAGGGAATTTaaaacacatttacatacagCACTTCTCCATTAGCATAACCTCAGATTCTAACAAATGCTAAATGTGTGTAGAAACACAATACTCTTCCTTCTGCAACAAACATCTGTAAGCCTACCTAAACACTTTAGTGTATCATCTGCAGTACAGCACTAGTGATTGAATAGCACATGTGTTGTCTTAATTGGCCAACAGTAAATTGATTGAATGTGTGTCTGTTTAGGCAAACAATTGGCCCATATTGCAGAAGTAAGTAACTACTCTATGTTAATCCTTCACAAGGAAGGCCTACATATATCTTTTTGCTTTAGTGGAGCATTTTGTGGACCCAAAGTAGGGTTATCGTTTTTCTGGCAGAATAAAGATGGACCCTGTGCCAAACGAAATGTCAGAAGACTATAGCAGTGATTCAATCCAAGGTGAGTTACAGAGCTGCGGACTAAACAGTCGACAATGCACCTTTTAAAGGCATTTCCCCGATGTTCACAGAGATCGCATTCATGGTAAACACTGTACATGTCAGATAAAGCATGCATTATCTTAAAAAGTCTGTTACATTACGCTGCTCTTGAACACGCCTTGGATTGAATCCTGGCCCATGTATACAAACTCAGTTTATAGTCAGTATAAAGGTGGATGAGTCCTGTTACTTGTTTACTCTTTCAGCATGTCAAACTCTCATTTTGAGTATTAAATGGCAGCTTAGTTGAGAACTACATTTTTAATGGTGGCAGTCACAGGCTGCCTTTATAATGGCATTATTCCTGACATAACAATGGATCAAACACATGTAAAACATTTGACTTGGTTGAGATTCTTAGAATGTCATTGTCCATAACACATACACTACTAGGTAATATCTGGTCATAAGGCTAATATAATGGCTGTTGTCTTGATCCGCCACTATCTGTTAGTTCAGATGTTAGGTCGATTTCTTTGTCAGTGTTACAGTAAGTtgtgatacagtacagtatatggcAGCTTCAGGGAAACTGGTCAAAGCTATCATGGAGACACTGCATTAAGTCTCACTCACATACACTCATCCATCGATCCATCGATCCATACATCcccacac

Function

NR:

description
PREDICTED: uncharacterized protein LOC108436206

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1678093 True 2100 lncRNA 0.40 2 57351520 57353653

Neighbor

gene id symbol gene type direction distance location
tegt LOC100196653 coding upstream 21793 57305804 ~ 57329727 (+)
LOC110494190 LOC106565431 coding upstream 46969 57275277 ~ 57304551 (+)
LOC110494189 LOC106565429 coding upstream 77519 57238260 ~ 57274001 (+)
nramp-alpha nramp-alpha coding upstream 125834 57176451 ~ 57225686 (+)
nelfcd nelfd coding upstream 239958 57105818 ~ 57111562 (+)
LOC110493228 LOC106583273 coding downstream 115100 57468753 ~ 57474567 (+)
LOC110494206 LOC108254821 coding downstream 144652 57498305 ~ 57548178 (+)
LOC110494197 LOC106565496 coding downstream 302296 57655949 ~ 57665568 (+)
LOC110494203 LOC106565438 coding downstream 330192 57683845 ~ 57688188 (+)
LOC110494205 LOC106565438 coding downstream 340523 57694176 ~ 57697563 (+)
G1467123 NA non-coding upstream 162 57349964 ~ 57351358 (+)
G1467121 NA non-coding upstream 2497 57348464 ~ 57349023 (+)
G1467113 NA non-coding upstream 11132 57339441 ~ 57340388 (+)
G1467054 NA non-coding upstream 138933 57194474 ~ 57212587 (+)
G1467041 NA non-coding upstream 177555 57173549 ~ 57173965 (+)
G1467124 NA non-coding downstream 5736 57359389 ~ 57359636 (+)
G1467126 LOC106565432 non-coding downstream 7469 57361122 ~ 57361382 (+)
G1467127 NA non-coding downstream 9110 57362763 ~ 57363049 (+)
G1467134 NA non-coding downstream 22271 57375924 ~ 57376166 (+)
G1467136 NA non-coding downstream 23310 57376963 ~ 57377183 (+)
G1467031 NA other upstream 201177 57149303 ~ 57150343 (+)
G1467030 NA other upstream 203779 57146488 ~ 57147741 (+)
G1467020 NA other upstream 232634 57117702 ~ 57118886 (+)
LOC110494160 LOC105017078 other upstream 768799 56575737 ~ 56584088 (+)
G1466224 gem other upstream 1130574 56219242 ~ 56220946 (+)
G1467159 LOC106565433 other downstream 125144 57478797 ~ 57554480 (+)
G1467219 NA other downstream 236212 57589865 ~ 57614300 (+)
G1469076 NA other downstream 1153644 58507297 ~ 58507885 (+)
G1470607 NA other downstream 2748239 60101892 ~ 60104007 (+)

Expression


Co-expression Network