G1467200


Basic Information

Item Value
gene id G1467200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 57464300 ~ 57464584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1678177
ATTTTGCATACTACAATTATATTTCATACTGGCATGGTTATGTGAAATTGATCCAATAAGACCCCATTGAGTTTGGCGGCCATATTAGAAAAAGGCttcggagggatggagggatgaaagaaaGAATGATAACAGAGAAAGCTGCCATTGCTGAACTGTTATCACACATTTTCCAACTCTAGGGACATGGACCTTCAAGAAAATCACTATGAGACATCAGCCCATGTGAGCCCGATCGACCCCCCAGCCTATGAACTAATACCACAGTTAAATCAAAGACCCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1678177 True 285 lncRNA 0.42 1 57464300 57464584

Neighbor

gene id symbol gene type direction distance location
tegt LOC100196653 coding upstream 134573 57305804 ~ 57329727 (+)
LOC110494190 LOC106565431 coding upstream 159749 57275277 ~ 57304551 (+)
LOC110494189 LOC106565429 coding upstream 190299 57238260 ~ 57274001 (+)
nramp-alpha nramp-alpha coding upstream 238614 57176451 ~ 57225686 (+)
nelfcd nelfd coding upstream 352738 57105818 ~ 57111562 (+)
LOC110493228 LOC106583273 coding downstream 4169 57468753 ~ 57474567 (+)
LOC110494206 LOC108254821 coding downstream 33721 57498305 ~ 57548178 (+)
LOC110494197 LOC106565496 coding downstream 191365 57655949 ~ 57665568 (+)
LOC110494203 LOC106565438 coding downstream 219261 57683845 ~ 57688188 (+)
LOC110494205 LOC106565438 coding downstream 229592 57694176 ~ 57697563 (+)
G1467198 NA non-coding upstream 1117 57462979 ~ 57463183 (+)
G1467180 NA non-coding upstream 22636 57441450 ~ 57441664 (+)
G1467170 NA non-coding upstream 35166 57428489 ~ 57429134 (+)
G1467138 NA non-coding upstream 81902 57382170 ~ 57382398 (+)
G1467136 NA non-coding upstream 87117 57376963 ~ 57377183 (+)
G1467206 NA non-coding downstream 8504 57473088 ~ 57473322 (+)
G1467159 LOC106565433 non-coding downstream 14213 57478797 ~ 57554480 (+)
G1467307 NA non-coding downstream 175983 57640567 ~ 57640839 (+)
G1467031 NA other upstream 313957 57149303 ~ 57150343 (+)
G1467030 NA other upstream 316559 57146488 ~ 57147741 (+)
G1467020 NA other upstream 345414 57117702 ~ 57118886 (+)
LOC110494160 LOC105017078 other upstream 881579 56575737 ~ 56584088 (+)
G1466224 gem other upstream 1243354 56219242 ~ 56220946 (+)
G1467219 NA other downstream 125281 57589865 ~ 57614300 (+)
G1469076 NA other downstream 1042713 58507297 ~ 58507885 (+)
G1470607 NA other downstream 2637308 60101892 ~ 60104007 (+)

Expression


Co-expression Network