Gene
RNA
| Item | Value |
|---|---|
| gene id | G1468403 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 58131056 ~ 58138441 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1679646 | True | 1040 | lncRNA | 0.38 | 2 | 58131056 | 58138441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494218 | LOC106565452 | coding | upstream | 2114 | 58070065 ~ 58128942 (+) |
| LOC110494215 | LOC106565449 | coding | upstream | 96276 | 57981152 ~ 58034780 (+) |
| LOC110494214 | LOC106565448 | coding | upstream | 181240 | 57940903 ~ 57949816 (+) |
| LOC118940480 | NA | coding | upstream | 212337 | 57903188 ~ 57918719 (+) |
| LOC110494208 | LOC106565442 | coding | upstream | 346065 | 57760679 ~ 57784991 (+) |
| LOC110494220 | LOC106583293 | coding | downstream | 58641 | 58135834 ~ 58249425 (+) |
| LOC110494225 | NA | coding | downstream | 167318 | 58305759 ~ 58309020 (+) |
| trnar-ucu-6 | NA | coding | downstream | 207134 | 58345575 ~ 58345664 (+) |
| LOC110494235 | LOC106565463 | coding | downstream | 558250 | 58696691 ~ 58707194 (+) |
| LOC110494238 | LOC106565465 | coding | downstream | 577631 | 58716072 ~ 58728214 (+) |
| G1468343 | NA | non-coding | upstream | 124395 | 58006148 ~ 58006661 (+) |
| G1468336 | NA | non-coding | upstream | 138397 | 57992407 ~ 57992659 (+) |
| G1468334 | NA | non-coding | upstream | 141599 | 57989249 ~ 57989457 (+) |
| G1468278 | NA | non-coding | upstream | 232296 | 57898424 ~ 57898760 (+) |
| G1468425 | NA | non-coding | downstream | 44115 | 58182556 ~ 58187474 (+) |
| G1468460 | NA | non-coding | downstream | 120565 | 58259006 ~ 58259155 (+) |
| G1468481 | NA | non-coding | downstream | 164176 | 58302617 ~ 58302943 (+) |
| G1468484 | NA | non-coding | downstream | 173467 | 58311908 ~ 58312115 (+) |
| G1468486 | NA | non-coding | downstream | 177702 | 58316143 ~ 58316366 (+) |
| G1467219 | NA | other | upstream | 516756 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 582878 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 647467 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 980713 | 57149303 ~ 57150343 (+) |
| G1467030 | NA | other | upstream | 983315 | 57146488 ~ 57147741 (+) |
| G1469076 | NA | other | downstream | 368856 | 58507297 ~ 58507885 (+) |
| G1470607 | NA | other | downstream | 1963451 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 2834037 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 3417878 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 4560062 | 62698503 ~ 62698815 (+) |
