Gene
RNA
| Item | Value |
|---|---|
| gene id | G1469087 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 58517300 ~ 58517499 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1680375 | True | 200 | lncRNA | 0.31 | 1 | 58517300 | 58517499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnar-ucu-6 | NA | coding | upstream | 171636 | 58345575 ~ 58345664 (+) |
| LOC110494225 | NA | coding | upstream | 208280 | 58305759 ~ 58309020 (+) |
| LOC110494220 | LOC106583293 | coding | upstream | 267875 | 58135834 ~ 58249425 (+) |
| LOC110494218 | LOC106565452 | coding | upstream | 388358 | 58070065 ~ 58128942 (+) |
| LOC110494215 | LOC106565449 | coding | upstream | 482520 | 57981152 ~ 58034780 (+) |
| LOC110494235 | LOC106565463 | coding | downstream | 179192 | 58696691 ~ 58707194 (+) |
| LOC110494238 | LOC106565465 | coding | downstream | 198573 | 58716072 ~ 58728214 (+) |
| LOC110494239 | LOC106565466 | coding | downstream | 315395 | 58832894 ~ 59011079 (+) |
| LOC100136832 | lrrn1 | coding | downstream | 693178 | 59210677 ~ 59245106 (+) |
| LOC110494244 | NA | coding | downstream | 740980 | 59258342 ~ 59266492 (+) |
| G1468596 | NA | non-coding | upstream | 23654 | 58493405 ~ 58493646 (+) |
| G1468593 | NA | non-coding | upstream | 27654 | 58489385 ~ 58489646 (+) |
| G1468592 | hoxc12ba | non-coding | upstream | 28525 | 58488171 ~ 58488775 (+) |
| G1468591 | NA | non-coding | upstream | 29749 | 58487284 ~ 58487551 (+) |
| G1468590 | LOC107578812 | non-coding | upstream | 30218 | 58484662 ~ 58487082 (+) |
| G1469111 | NA | non-coding | downstream | 17026 | 58534525 ~ 58534793 (+) |
| G1469113 | NA | non-coding | downstream | 19038 | 58536537 ~ 58536815 (+) |
| G1469217 | NA | non-coding | downstream | 210848 | 58728347 ~ 58731402 (+) |
| G1469237 | NA | non-coding | downstream | 240011 | 58757510 ~ 58839482 (+) |
| G1469374 | NA | non-coding | downstream | 415514 | 58933013 ~ 58933298 (+) |
| G1469076 | NA | other | upstream | 9415 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 903000 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 969122 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 1033711 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 1366957 | 57149303 ~ 57150343 (+) |
| G1470607 | NA | other | downstream | 1584393 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 2454979 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 3038820 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 4181004 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 4192840 | 62710339 ~ 62711136 (+) |
