G1469113


Basic Information

Item Value
gene id G1469113
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 58536537 ~ 58536815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1680402
tccttgatgtttctacaacttgataggagtacacctgtggtaaattcaattggacattatttggaaatgcacacacctgtctatataaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaggaattatccgtagagctccgagacaggtttgtgtcgaggcacagatctggagaatggtaccaaacaatgtctgcagaattgaaggtccccaagaacacgatggcctccatcattcttaaatggaagaagtttggaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1680402 True 279 lncRNA 0.44 1 58536537 58536815

Neighbor

gene id symbol gene type direction distance location
trnar-ucu-6 NA coding upstream 190873 58345575 ~ 58345664 (+)
LOC110494225 NA coding upstream 227517 58305759 ~ 58309020 (+)
LOC110494220 LOC106583293 coding upstream 287112 58135834 ~ 58249425 (+)
LOC110494218 LOC106565452 coding upstream 407595 58070065 ~ 58128942 (+)
LOC110494215 LOC106565449 coding upstream 501757 57981152 ~ 58034780 (+)
LOC110494235 LOC106565463 coding downstream 159876 58696691 ~ 58707194 (+)
LOC110494238 LOC106565465 coding downstream 179257 58716072 ~ 58728214 (+)
LOC110494239 LOC106565466 coding downstream 296079 58832894 ~ 59011079 (+)
LOC100136832 lrrn1 coding downstream 673862 59210677 ~ 59245106 (+)
LOC110494244 NA coding downstream 721664 59258342 ~ 59266492 (+)
G1469111 NA non-coding upstream 1744 58534525 ~ 58534793 (+)
G1469087 NA non-coding upstream 19038 58517300 ~ 58517499 (+)
G1468596 NA non-coding upstream 42891 58493405 ~ 58493646 (+)
G1468593 NA non-coding upstream 46891 58489385 ~ 58489646 (+)
G1468592 hoxc12ba non-coding upstream 47762 58488171 ~ 58488775 (+)
G1469217 NA non-coding downstream 191532 58728347 ~ 58731402 (+)
G1469237 NA non-coding downstream 220695 58757510 ~ 58839482 (+)
G1469374 NA non-coding downstream 396198 58933013 ~ 58933298 (+)
G1469394 NA non-coding downstream 504761 59041576 ~ 59041883 (+)
G1469405 NA non-coding downstream 532459 59069274 ~ 59069515 (+)
G1469076 NA other upstream 28652 58507297 ~ 58507885 (+)
G1467219 NA other upstream 922237 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 988359 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 1052948 57478797 ~ 57554480 (+)
G1467031 NA other upstream 1386194 57149303 ~ 57150343 (+)
G1470607 NA other downstream 1565077 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 2435663 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 3019504 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 4161688 62698503 ~ 62698815 (+)
G1473177 NA other downstream 4173524 62710339 ~ 62711136 (+)

Expression


Co-expression Network