G1469237



Basic Information


Item Value
gene id G1469237
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 58757510 ~ 58839482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1680546
tttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacatttttcccattcctccttgcaaaacagcttgagctcagtgaggttggatggagagcatttgtgaacagcatttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggttcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagattccatcaggttttcttccagaatggtcctgtatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1680546 True 440 lncRNA 0.40 2 58757510 58839482

Neighbor


gene id symbol gene type direction distance location
LOC110494238 LOC106565465 coding upstream 29296 58716072 ~ 58728214 (+)
LOC110494235 LOC106565463 coding upstream 50316 58696691 ~ 58707194 (+)
trnar-ucu-6 NA coding upstream 411846 58345575 ~ 58345664 (+)
LOC110494225 NA coding upstream 448490 58305759 ~ 58309020 (+)
LOC110494220 LOC106583293 coding upstream 508085 58135834 ~ 58249425 (+)
LOC100136832 lrrn1 coding downstream 371195 59210677 ~ 59245106 (+)
LOC110494244 NA coding downstream 418997 59258342 ~ 59266492 (+)
LOC110494246 LOC106565476 coding downstream 443317 59282799 ~ 59438025 (+)
LOC110494249 LOC106565477 coding downstream 621832 59461314 ~ 59465333 (+)
LOC118940562 NA coding downstream 678098 59517580 ~ 59517708 (+)
G1469217 NA non-coding upstream 26108 58728347 ~ 58731402 (+)
G1469113 NA non-coding upstream 220695 58536537 ~ 58536815 (+)
G1469111 NA non-coding upstream 222717 58534525 ~ 58534793 (+)
G1469087 NA non-coding upstream 240011 58517300 ~ 58517499 (+)
G1468596 NA non-coding upstream 263864 58493405 ~ 58493646 (+)
G1469374 NA non-coding downstream 93531 58933013 ~ 58933298 (+)
G1469394 NA non-coding downstream 202094 59041576 ~ 59041883 (+)
G1469405 NA non-coding downstream 229792 59069274 ~ 59069515 (+)
G1469406 NA non-coding downstream 230108 59069590 ~ 59069927 (+)
G1469407 NA non-coding downstream 230447 59069929 ~ 59070138 (+)
G1469076 NA other upstream 249625 58507297 ~ 58507885 (+)
G1467219 NA other upstream 1143210 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 1209332 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 1273921 57478797 ~ 57554480 (+)
G1467031 NA other upstream 1607167 57149303 ~ 57150343 (+)
G1470607 NA other downstream 1262410 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 2132996 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 2716837 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 3859021 62698503 ~ 62698815 (+)
G1473177 NA other downstream 3870857 62710339 ~ 62711136 (+)

Expression



Co-expression Network