Gene
RNA
| Item | Value |
|---|---|
| gene id | G1469850 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 59248265 ~ 59248549 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1681187 | True | 285 | lncRNA | 0.36 | 1 | 59248265 | 59248549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136832 | lrrn1 | coding | upstream | 3159 | 59210677 ~ 59245106 (+) |
| LOC110494239 | LOC106565466 | coding | upstream | 237186 | 58832894 ~ 59011079 (+) |
| LOC110494238 | LOC106565465 | coding | upstream | 520051 | 58716072 ~ 58728214 (+) |
| LOC110494235 | LOC106565463 | coding | upstream | 541071 | 58696691 ~ 58707194 (+) |
| trnar-ucu-6 | NA | coding | upstream | 902601 | 58345575 ~ 58345664 (+) |
| LOC110494244 | NA | coding | downstream | 9930 | 59258342 ~ 59266492 (+) |
| LOC110494246 | LOC106565476 | coding | downstream | 34250 | 59282799 ~ 59438025 (+) |
| LOC110494249 | LOC106565477 | coding | downstream | 212765 | 59461314 ~ 59465333 (+) |
| LOC118940562 | NA | coding | downstream | 269031 | 59517580 ~ 59517708 (+) |
| LOC118940599 | NA | coding | downstream | 270289 | 59518838 ~ 59518979 (+) |
| G1469849 | LOC106565475 | non-coding | upstream | 654 | 59247141 ~ 59247611 (+) |
| G1469761 | NA | non-coding | upstream | 130730 | 59117285 ~ 59117535 (+) |
| G1469749 | NA | non-coding | upstream | 135506 | 59112540 ~ 59112759 (+) |
| G1469415 | NA | non-coding | upstream | 161829 | 59086047 ~ 59086436 (+) |
| G1469411 | NA | non-coding | upstream | 163826 | 59084225 ~ 59084439 (+) |
| G1469851 | NA | non-coding | downstream | 656 | 59249205 ~ 59249504 (+) |
| G1469871 | NA | non-coding | downstream | 156625 | 59405174 ~ 59405793 (+) |
| G1469990 | NA | non-coding | downstream | 202213 | 59450762 ~ 59451182 (+) |
| G1470277 | NA | non-coding | downstream | 247278 | 59495827 ~ 59496126 (+) |
| G1469076 | NA | other | upstream | 740380 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 1633965 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 1700087 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 1764676 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 2097922 | 57149303 ~ 57150343 (+) |
| G1470607 | NA | other | downstream | 853343 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 1723929 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 2307770 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 3449954 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 3461790 | 62710339 ~ 62711136 (+) |
