Gene
RNA
| Item | Value |
|---|---|
| gene id | G1469871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 59405174 ~ 59405793 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1681211 | True | 600 | lncRNA | 0.38 | 2 | 59405174 | 59405793 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494244 | NA | coding | upstream | 138682 | 59258342 ~ 59266492 (+) |
| LOC100136832 | lrrn1 | coding | upstream | 160068 | 59210677 ~ 59245106 (+) |
| LOC110494239 | LOC106565466 | coding | upstream | 394095 | 58832894 ~ 59011079 (+) |
| LOC110494238 | LOC106565465 | coding | upstream | 676960 | 58716072 ~ 58728214 (+) |
| LOC110494235 | LOC106565463 | coding | upstream | 697980 | 58696691 ~ 58707194 (+) |
| LOC110494249 | LOC106565477 | coding | downstream | 55521 | 59461314 ~ 59465333 (+) |
| LOC118940562 | NA | coding | downstream | 111787 | 59517580 ~ 59517708 (+) |
| LOC118940599 | NA | coding | downstream | 113045 | 59518838 ~ 59518979 (+) |
| LOC118940610 | NA | coding | downstream | 114316 | 59520109 ~ 59520250 (+) |
| LOC118940552 | NA | coding | downstream | 115592 | 59521385 ~ 59521526 (+) |
| G1469851 | NA | non-coding | upstream | 155670 | 59249205 ~ 59249504 (+) |
| G1469850 | NA | non-coding | upstream | 156625 | 59248265 ~ 59248549 (+) |
| G1469849 | LOC106565475 | non-coding | upstream | 157563 | 59247141 ~ 59247611 (+) |
| G1469761 | NA | non-coding | upstream | 287639 | 59117285 ~ 59117535 (+) |
| G1469990 | NA | non-coding | downstream | 44969 | 59450762 ~ 59451182 (+) |
| G1470277 | NA | non-coding | downstream | 90034 | 59495827 ~ 59496126 (+) |
| G1470290 | NA | non-coding | downstream | 100241 | 59506034 ~ 59506337 (+) |
| LOC118940527 | NA | non-coding | downstream | 207063 | 59612856 ~ 59613886 (+) |
| G1470301 | NA | non-coding | downstream | 208272 | 59614065 ~ 59618582 (+) |
| G1469076 | NA | other | upstream | 897289 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 1790874 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 1856996 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 1921585 | 57478797 ~ 57554480 (+) |
| G1467031 | NA | other | upstream | 2254831 | 57149303 ~ 57150343 (+) |
| G1470607 | NA | other | downstream | 696099 | 60101892 ~ 60104007 (+) |
| G1471723 | LOC100380707 | other | downstream | 1566685 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 2150526 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 3292710 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 3304546 | 62710339 ~ 62711136 (+) |
