G1470132


Basic Information

Item Value
gene id G1470132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59459792 ~ 59465327 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681485
GCAGATAAAATACTTTATTAATACGCTTATATAATGTATGTCAACATTTATAGACAAAATATGTACatcaaacatctttctggtaggTCCCAAAATATCAAAGTACCTCTTTCTATAGAAAACTAATCTTCTGTTAAAACATATACATTCACTTCTCGCCAACTCCCAAATACATTTCATAAACATCTGATGTTTTCTTTTATCAGTGTTTCACAAGTAAAAGGCAACAGGATGATAAACTCCAGGTTTGACTTGAGCAGAGTCAGATTGCAGATCAGGGTCAGCGCAGGGCTACAGTATGTACATTAGTTATTATGTGGTAAAACGACTGTCCAACCTTTCTCTCTGGTTCGAGCGCTAGGACACGTATCAAAAATAGAGATGTACAAGAAGTATAAACAATAATTACAAAAAGTCCCTCTAAACTGTCAGTGAATTCCCAACTTGACATGGTCACATGATGGCCTCACTAACTCCATACAGTAAGGAAATTATTTCACTCAGGATGTTTGTTGTTGTCATAGGGAATGGGGCAAAGCGCAGTGTCAGTGATGGCAATGGTGACCTAAGGTAAATAGACAGCAACCTTTGGGTGAATGGTGACTATTGACATTTGGTGTGACATGGTTTACAAGGACGGTGTGTGTACAGCTGAGCCCTGTCAGTGTCCACAGCATGTAGAAACCTCAACAGCAGCAACATCTACGGGACTGCCACTTTTTTACATTTATACAttcaaccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681485 True 798 lncRNA 0.39 2 59459792 59465327
Loading

Neighbor

gene id symbol gene type direction distance location
sumf1 sumf1 coding downstream 177218 59268238 ~ 59282574 (-)
LOC118940103 NA coding downstream 364738 59093589 ~ 59095054 (-)
LOC110494243 LOC106565512 coding downstream 367311 59087339 ~ 59092481 (-)
LOC110494242 zc3h10 coding downstream 382186 59071949 ~ 59077606 (-)
esyt1b LOC106565469 coding downstream 391366 59028543 ~ 59068426 (-)
LOC110494248 LOC106565478 coding upstream 13073 59478400 ~ 59491538 (-)
LOC110493229 LOC106565594 coding upstream 245010 59710337 ~ 59832535 (-)
atf1 LOC106565593 coding upstream 412992 59878319 ~ 59905189 (-)
LOC110493230 LOC106565592 coding upstream 446207 59911534 ~ 59990825 (-)
LOC110494253 LOC106565590 coding upstream 526193 59990975 ~ 59999740 (-)
G1470184 LOC106565476 non-coding downstream 81425 59376094 ~ 59378367 (-)
G1470157 NA non-coding downstream 86627 59350366 ~ 59373165 (-)
G1470101 NA non-coding downstream 188222 59270528 ~ 59271570 (-)
G1470098 NA non-coding downstream 192633 59266754 ~ 59267159 (-)
G1470097 NA non-coding downstream 194268 59265325 ~ 59265524 (-)
G1470297 NA non-coding upstream 144046 59609373 ~ 59610007 (-)
G1470300 NA non-coding upstream 147529 59612856 ~ 59613881 (-)
G1470310 NA non-coding upstream 158605 59623932 ~ 59624333 (-)
G1470314 NA non-coding upstream 161189 59626516 ~ 59626758 (-)
G1470350 NA non-coding upstream 190131 59655458 ~ 59655669 (-)
hig1a hig1a other downstream 2227085 57229440 ~ 57233433 (-)
elmo2 LOC106565399 other downstream 2959467 56494856 ~ 56530610 (-)
dnai1.2 dnai1 other downstream 3292455 56130667 ~ 56167366 (-)
LOC110494137 LOC106565384 other downstream 3489078 55954473 ~ 55971001 (-)
G1464954 NA other downstream 4731897 54726796 ~ 54727895 (-)
G1470802 NA other upstream 209214 59674541 ~ 59676694 (-)
LOC110494257 LOC106565586 other upstream 641342 60104033 ~ 60110249 (-)
G1471219 srgap3 other upstream 910419 60375633 ~ 60376864 (-)
G1471564 NA other upstream 1172853 60638180 ~ 60639335 (-)

Expression

G1470132 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1470132 Expression in each Bioproject

Bar chart with 13 bars.
G1470132 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
End of interactive chart.

Co-expression Network