Gene
RNA
| Item | Value |
|---|---|
| gene id | G1470802 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 59674541 ~ 59676694 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682225 | True | 2154 | TUCP | 0.44 | 1 | 59674541 | 59676694 |
59,671,200
59,671,600
59,672,000
59,672,400
59,672,800
59,673,200
59,673,600
59,674,000
59,674,400
59,674,800
59,675,200
59,675,600
59,676,000
59,676,400
59,676,800
59,677,200
59,677,600
59,678,000
59,678,400
59,678,800
59,679,200
59,679,600
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494248 | LOC106565478 | coding | downstream | 183003 | 59478400 ~ 59491538 (-) |
| sumf1 | sumf1 | coding | downstream | 391967 | 59268238 ~ 59282574 (-) |
| LOC118940103 | NA | coding | downstream | 579487 | 59093589 ~ 59095054 (-) |
| LOC110494243 | LOC106565512 | coding | downstream | 582060 | 59087339 ~ 59092481 (-) |
| LOC110494242 | zc3h10 | coding | downstream | 596935 | 59071949 ~ 59077606 (-) |
| LOC110493229 | LOC106565594 | coding | upstream | 33643 | 59710337 ~ 59832535 (-) |
| atf1 | LOC106565593 | coding | upstream | 201625 | 59878319 ~ 59905189 (-) |
| LOC110493230 | LOC106565592 | coding | upstream | 234840 | 59911534 ~ 59990825 (-) |
| LOC110494253 | LOC106565590 | coding | upstream | 314826 | 59990975 ~ 59999740 (-) |
| LOC110494254 | LOC106565589 | coding | upstream | 331310 | 60008004 ~ 60028651 (-) |
| G1470350 | NA | non-coding | downstream | 18872 | 59655458 ~ 59655669 (-) |
| G1470314 | NA | non-coding | downstream | 47783 | 59626516 ~ 59626758 (-) |
| G1470310 | NA | non-coding | downstream | 50208 | 59623932 ~ 59624333 (-) |
| G1470300 | NA | non-coding | downstream | 60660 | 59612856 ~ 59613881 (-) |
| G1470297 | NA | non-coding | downstream | 64534 | 59609373 ~ 59610007 (-) |
| G1470805 | NA | non-coding | upstream | 4058 | 59680752 ~ 59680972 (-) |
| G1470824 | NA | non-coding | upstream | 29350 | 59706044 ~ 59706297 (-) |
| G1470934 | NA | non-coding | upstream | 229035 | 59905729 ~ 59910291 (-) |
| G1470937 | NA | non-coding | upstream | 233712 | 59910406 ~ 59911445 (-) |
| G1470932 | NA | non-coding | upstream | 325948 | 60002642 ~ 60004577 (-) |
| hig1a | hig1a | other | downstream | 2441834 | 57229440 ~ 57233433 (-) |
| elmo2 | LOC106565399 | other | downstream | 3174216 | 56494856 ~ 56530610 (-) |
| dnai1.2 | dnai1 | other | downstream | 3507204 | 56130667 ~ 56167366 (-) |
| LOC110494137 | LOC106565384 | other | downstream | 3703827 | 55954473 ~ 55971001 (-) |
| G1464954 | NA | other | downstream | 4946646 | 54726796 ~ 54727895 (-) |
| LOC110494257 | LOC106565586 | other | upstream | 429975 | 60104033 ~ 60110249 (-) |
| G1471219 | srgap3 | other | upstream | 699052 | 60375633 ~ 60376864 (-) |
| G1471564 | NA | other | upstream | 961486 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 2569685 | 62246379 ~ 62250654 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| eurasian perch (Perca fluviatilis) | G49083 | LOC103354491,LOC102226477,LOC108232148 | unknown | NC_053116.1 | CM020913.1 | 12126886 ~ 12128425 (-) |
| bowfin (Amia calva) | G52361 | NA | non-coding | CM030126.1 | CM030126.1 | 14542639 ~ 14545754 (+) |
| tiger barb (Puntius tetrazona) | G44245 | NA | non-coding | NC_056704.1 | CM032073.1 | 10521974 ~ 10554595 (+) |
