G1470383 (LOC106583170)


Basic Information

Item Value
gene id G1470383
gene name LOC106583170
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59716609 ~ 59718373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681752
CTTGGTATAGGTTTTTGTGGTTTCTTTGAGCCAAGTTTTTTCATGGCAGTGTGGTATTTCTTCTGCTCCTCTGTCATGAATATATCCTGACCTCCAAACTTTTTCTTTTGCTGGTTAAAGTTGTCAATGATGACACCAATGAAGAGATTGAGGGTAAAGAAAGAGCCAAAGATGATGAAGGCAACAAAGTAGATATACATGTAGATGTTGTCTTCATAGATCGGCTGAT

Function

NR:

description
PREDICTED: sodium channel protein type 4 subunit alpha B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681752 True 229 lncRNA 0.38 2 59716609 59718373

Neighbor

gene id symbol gene type direction distance location
LOC110494250 LOC106565597 coding upstream 46502 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 94123 59622361 ~ 59622486 (+)
LOC118940556 NA coding upstream 95173 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 96240 59620247 ~ 59620369 (+)
LOC118940559 NA coding upstream 97298 59619189 ~ 59619311 (+)
LOC110494251 LOC106565596 coding downstream 138852 59857225 ~ 59887042 (+)
LOC110494255 LOC106565587 coding downstream 344877 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 360377 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 526412 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 547106 60265479 ~ 60383800 (+)
G1470341 NA non-coding upstream 68613 59647740 ~ 59647996 (+)
G1470335 NA non-coding upstream 72778 59643235 ~ 59643831 (+)
G1470331 NA non-coding upstream 77170 59639206 ~ 59639439 (+)
G1470301 NA non-coding upstream 98027 59614065 ~ 59618582 (+)
LOC118940527 NA non-coding upstream 102723 59612856 ~ 59613886 (+)
G1470431 NA non-coding downstream 192035 59910408 ~ 59911460 (+)
G1470533 NA non-coding downstream 261687 59980060 ~ 59980665 (+)
G1470538 NA non-coding downstream 272631 59991004 ~ 59993399 (+)
G1470549 NA non-coding downstream 281689 60000062 ~ 60000432 (+)
G1470550 NA non-coding downstream 282591 60000964 ~ 60001173 (+)
G1469076 NA other upstream 1208724 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2102309 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2168431 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2233020 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2566266 57149303 ~ 57150343 (+)
G1470607 NA other downstream 383519 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1254105 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1837946 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2980130 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2991966 62710339 ~ 62711136 (+)

Expression


Co-expression Network