G1470431


Basic Information

Item Value
gene id G1470431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59910408 ~ 59911460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681819
accagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttgggtgcgtttccttccctctgcggtccaactcatcccaaactatctcaattgggttgatgtcgggtgattgtggaggccaggtcatctgatgcagaactcaatcactctccttcttggtcaaatagcctttgcacagcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccactaagctcaaaccagatgggatgacttatcgctgcagaatgccgtggtagccatgctggttaagtgtgctttgaattgtaaataaatcacagacagtgtcaccagcaaagcacccccacaccattacacctcctcctccatagttcacggtgggaaccacgcatgcggagatcctccgttcacctaccctccgtctcacaaagacatgccggttggaaccaaaaatctccaagcacacatttccaccggtctaatgtcctttgcttgtgtttcttggcccaatcaagtacTGACGTcctgattcacccagtctccagttgatgttgatatgtgtctgttacttgaactctgtgaaccaTTTATTTGTGCTGAAATCTGAGGTGCAATTAACTctattgaacttatcctctgcagtagaggtaactctgggtcttcctttcctgtggcggttactcatgagagccagtttcatcatagcgcttgacgttttttgcgactgcacaattttccgtattgactgacctttatgtcttaaagtaatgatggaatgtcatttgtctttgcttatttgagctcttcttgccataatatgtacttggtcttttacaaatAGAGCCATCTTCTgaataccatccctaccttgtcacaacacatctgactggctgaaatgcactattaaggaaagaaattccacaaattaggcacacctgttaattgaaatgcattccaagtgactacctcatgaagctggttgagataatgccaggagtgtgcaaagctgtcatgaaggcaaagggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681819 True 1053 lncRNA 0.45 1 59910408 59911460

Neighbor

gene id symbol gene type direction distance location
LOC110494251 LOC106565596 coding upstream 23366 59857225 ~ 59887042 (+)
LOC110494250 LOC106565597 coding upstream 240301 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 287922 59622361 ~ 59622486 (+)
LOC118940556 NA coding upstream 288972 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 290039 59620247 ~ 59620369 (+)
LOC110494255 LOC106565587 coding downstream 151790 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 167290 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 333325 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 354019 60265479 ~ 60383800 (+)
rad18 rad18 coding downstream 522466 60433926 ~ 60508595 (+)
G1470383 LOC106583170 non-coding upstream 192035 59716609 ~ 59718373 (+)
G1470341 NA non-coding upstream 262412 59647740 ~ 59647996 (+)
G1470335 NA non-coding upstream 266577 59643235 ~ 59643831 (+)
G1470331 NA non-coding upstream 270969 59639206 ~ 59639439 (+)
G1470301 NA non-coding upstream 291826 59614065 ~ 59618582 (+)
G1470533 NA non-coding downstream 68600 59980060 ~ 59980665 (+)
G1470538 NA non-coding downstream 79544 59991004 ~ 59993399 (+)
G1470549 NA non-coding downstream 88602 60000062 ~ 60000432 (+)
G1470550 NA non-coding downstream 89504 60000964 ~ 60001173 (+)
G1470537 NA non-coding downstream 91194 60002654 ~ 60004780 (+)
G1469076 NA other upstream 1402523 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2296108 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2362230 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2426819 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2760065 57149303 ~ 57150343 (+)
G1470607 NA other downstream 190432 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 1061018 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1644859 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2787043 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2798879 62710339 ~ 62711136 (+)

Expression


Co-expression Network