G1470533


Basic Information

Item Value
gene id G1470533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 59980060 ~ 59980665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681921
gcttaggaacagtgggttaactgcctgttcaggggcagaacaacagatttgtaccttgtcagctcggggatttgaacttgcaacctttcggttactagtccaacgctctaaccactaggctaccctgcctacaAACGtgatgaaaatctgttgttcattCATTTACTTTGAaaaagcattgtatctggtcaaacaattTTTTCCCAAagtttgtctttcataatttggtgagatatgcatggaTGTGTAGGTTCAGAATTTGTTGTTGGCAAGTCATGCCTAAGTTTGATAATCTTACAGTACATTGCCAATCGGCTGTGAagacttatttgccatttcttttgcctcatccctctcaaccatacaatttttcaatttaTCATCAATCCAAGAGGATTTAACAGTTCTTTCCAGTCATTTGCTTATAAGTAAATGGAATAAgacatttcataaatgtgtcaagtgcagcgtctggttgctcctcATTACTACAAACAAATACTGTAtgtcccttcagaaagtattcatactccttgacttattccaaatgTTCTTATGGTTACAGCCTGAACtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681921 True 574 lncRNA 0.38 2 59980060 59980665

Neighbor

gene id symbol gene type direction distance location
LOC110494251 LOC106565596 coding upstream 93018 59857225 ~ 59887042 (+)
LOC110494250 LOC106565597 coding upstream 309953 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 357574 59622361 ~ 59622486 (+)
LOC118940556 NA coding upstream 358624 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 359691 59620247 ~ 59620369 (+)
LOC110494255 LOC106565587 coding downstream 82585 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 98085 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 264120 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 284814 60265479 ~ 60383800 (+)
rad18 rad18 coding downstream 453261 60433926 ~ 60508595 (+)
G1470431 NA non-coding upstream 68600 59910408 ~ 59911460 (+)
G1470383 LOC106583170 non-coding upstream 261687 59716609 ~ 59718373 (+)
G1470341 NA non-coding upstream 332064 59647740 ~ 59647996 (+)
G1470335 NA non-coding upstream 336229 59643235 ~ 59643831 (+)
G1470331 NA non-coding upstream 340621 59639206 ~ 59639439 (+)
G1470538 NA non-coding downstream 10339 59991004 ~ 59993399 (+)
G1470549 NA non-coding downstream 19397 60000062 ~ 60000432 (+)
G1470550 NA non-coding downstream 20299 60000964 ~ 60001173 (+)
G1470537 NA non-coding downstream 21989 60002654 ~ 60004780 (+)
G1470551 NA non-coding downstream 24486 60005151 ~ 60005493 (+)
G1469076 NA other upstream 1472175 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2365760 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2431882 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2496471 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2829717 57149303 ~ 57150343 (+)
G1470607 NA other downstream 121227 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 991813 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1575654 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2717838 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2729674 62710339 ~ 62711136 (+)

Expression


Co-expression Network