G1470556


Basic Information

Item Value
gene id G1470556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60012401 ~ 60012700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681953
GAAGGGCGATCGTCCGAGGCCCAGGGGACAGGTGCCAGTCTTGTAGTTCCCAGGGGCGCTGAAGCCATTCACAAAGCCACTGTTGGGGAACGGGGCCTGGATgaaagagaaggaaaaaaatGCCACCCACGATCACTCAGTGTAGCCGGTCAATGACAAAGGTTAATCACCTCAGTTACGACACAGCTCTTACAGGAACAGCTGATCCTGACAGTGCTACATTACTAAATGTCATGACCACTCGCACCCCAGATTGCAAGGTTAAGGGTGTGTGTTACAGCTGACACATGGTATATTCAT

Function

NR:

description
la-related protein 4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681953 True 300 lncRNA 0.51 1 60012401 60012700

Neighbor

gene id symbol gene type direction distance location
LOC110494251 LOC106565596 coding upstream 125359 59857225 ~ 59887042 (+)
LOC110494250 LOC106565597 coding upstream 342294 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 389915 59622361 ~ 59622486 (+)
LOC118940556 NA coding upstream 390965 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 392032 59620247 ~ 59620369 (+)
LOC110494255 LOC106565587 coding downstream 50550 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 66050 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 232085 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 252779 60265479 ~ 60383800 (+)
rad18 rad18 coding downstream 421226 60433926 ~ 60508595 (+)
G1470555 LOC106565589 non-coding upstream 1078 60011086 ~ 60011323 (+)
G1470554 NA non-coding upstream 1800 60009768 ~ 60010601 (+)
G1470553 LOC106565589 non-coding upstream 3305 60006148 ~ 60009096 (+)
G1470551 NA non-coding upstream 6908 60005151 ~ 60005493 (+)
G1470537 NA non-coding upstream 7621 60002654 ~ 60004780 (+)
G1470557 LOC106565589 non-coding downstream 530 60013230 ~ 60013522 (+)
G1470575 NA non-coding downstream 26191 60038891 ~ 60039182 (+)
G1470585 NA non-coding downstream 36513 60049213 ~ 60049467 (+)
G1470586 NA non-coding downstream 37148 60049848 ~ 60050234 (+)
G1470595 NA non-coding downstream 47870 60060570 ~ 60060770 (+)
G1469076 NA other upstream 1504516 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2398101 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2464223 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2528812 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2862058 57149303 ~ 57150343 (+)
G1470607 NA other downstream 89192 60101892 ~ 60104007 (+)
G1471723 LOC100380707 other downstream 959778 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1543619 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2685803 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2697639 62710339 ~ 62711136 (+)

Expression


Co-expression Network