G1470586


Basic Information

Item Value
gene id G1470586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60049848 ~ 60050234 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1681987
cctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcattgatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1681987 True 387 lncRNA 0.39 1 60049848 60050234

Neighbor

gene id symbol gene type direction distance location
LOC110494251 LOC106565596 coding upstream 162806 59857225 ~ 59887042 (+)
LOC110494250 LOC106565597 coding upstream 379741 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 427362 59622361 ~ 59622486 (+)
LOC118940556 NA coding upstream 428412 59621304 ~ 59621436 (+)
LOC118940560 NA coding upstream 429479 59620247 ~ 59620369 (+)
LOC110494255 LOC106565587 coding downstream 13016 60063250 ~ 60078437 (+)
LOC110494256 LOC106565588 coding downstream 28516 60078750 ~ 60095370 (+)
LOC110494259 LOC106565584 coding downstream 194551 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 215245 60265479 ~ 60383800 (+)
rad18 rad18 coding downstream 383692 60433926 ~ 60508595 (+)
G1470585 NA non-coding upstream 381 60049213 ~ 60049467 (+)
G1470575 NA non-coding upstream 10666 60038891 ~ 60039182 (+)
G1470557 LOC106565589 non-coding upstream 36326 60013230 ~ 60013522 (+)
G1470556 NA non-coding upstream 37148 60012401 ~ 60012700 (+)
G1470555 LOC106565589 non-coding upstream 38525 60011086 ~ 60011323 (+)
G1470595 NA non-coding downstream 10336 60060570 ~ 60060770 (+)
G1470607 NA non-coding downstream 51984 60101892 ~ 60104007 (+)
G1470608 NA non-coding downstream 53794 60104028 ~ 60105171 (+)
G1470609 NA non-coding downstream 55122 60105356 ~ 60105582 (+)
G1470610 LOC106565586 non-coding downstream 55359 60105593 ~ 60106359 (+)
G1469076 NA other upstream 1541963 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2435548 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2501670 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2566259 57478797 ~ 57554480 (+)
G1467031 NA other upstream 2899505 57149303 ~ 57150343 (+)
G1471723 LOC100380707 other downstream 922244 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1506085 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2648269 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2660105 62710339 ~ 62711136 (+)

Expression


Co-expression Network