Gene
RNA
| Item | Value |
|---|---|
| gene id | G1470618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60123378 ~ 60123586 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682033 | True | 209 | lncRNA | 0.41 | 1 | 60123378 | 60123586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494256 | LOC106565588 | coding | upstream | 28008 | 60078750 ~ 60095370 (+) |
| LOC110494255 | LOC106565587 | coding | upstream | 44941 | 60063250 ~ 60078437 (+) |
| LOC110494251 | LOC106565596 | coding | upstream | 236336 | 59857225 ~ 59887042 (+) |
| LOC110494250 | LOC106565597 | coding | upstream | 453271 | 59657801 ~ 59670107 (+) |
| LOC118940557 | NA | coding | upstream | 500892 | 59622361 ~ 59622486 (+) |
| LOC110494259 | LOC106565584 | coding | downstream | 121199 | 60244785 ~ 60247910 (+) |
| srgap3 | srgap3 | coding | downstream | 141893 | 60265479 ~ 60383800 (+) |
| rad18 | rad18 | coding | downstream | 310340 | 60433926 ~ 60508595 (+) |
| LOC110494264 | oxtr | coding | downstream | 452092 | 60575678 ~ 60599614 (+) |
| LOC110494272 | gpx1 | coding | downstream | 846738 | 60970324 ~ 60971719 (+) |
| G1470616 | NA | non-coding | upstream | 5038 | 60118078 ~ 60118340 (+) |
| G1470611 | LOC106565586 | non-coding | upstream | 15467 | 60107132 ~ 60107911 (+) |
| G1470610 | LOC106565586 | non-coding | upstream | 17019 | 60105593 ~ 60106359 (+) |
| G1470609 | NA | non-coding | upstream | 17796 | 60105356 ~ 60105582 (+) |
| G1470608 | NA | non-coding | upstream | 18207 | 60104028 ~ 60105171 (+) |
| G1470626 | NA | non-coding | downstream | 14574 | 60138160 ~ 60138435 (+) |
| G1470628 | NA | non-coding | downstream | 15937 | 60139523 ~ 60139760 (+) |
| G1470629 | NA | non-coding | downstream | 16834 | 60140420 ~ 60140656 (+) |
| G1470634 | NA | non-coding | downstream | 24621 | 60148207 ~ 60148411 (+) |
| G1470642 | NA | non-coding | downstream | 38395 | 60161981 ~ 60162273 (+) |
| G1470607 | NA | other | upstream | 19371 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 1615493 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 2509078 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 2575200 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 2639789 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 848892 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 1432733 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 2574917 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 2586753 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 3093362 | 63216948 ~ 63217594 (+) |
