G1471074



Basic Information


Item Value
gene id G1471074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60163916 ~ 60164115 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1682529
CAAAACGAATAAGAAAGATCTGTTTTAGTACAGGGAAACTTGGAAATTACTGTTTGCGCACGCCATGAAGAAAGGACCTGCTAAAaccggtttcctattgaacatacttctttccgtaagaaatattatagtttgatgacattttagggtatctgaggagtaaatagaaacatattttgacttgttgaaacaaagtttag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1682529 True 200 lncRNA 0.34 1 60163916 60164115

Neighbor


gene id symbol gene type direction distance location
LOC110494257 LOC106565586 coding downstream 53667 60104033 ~ 60110249 (-)
LOC110494254 LOC106565589 coding downstream 135265 60008004 ~ 60028651 (-)
LOC110494253 LOC106565590 coding downstream 164176 59990975 ~ 59999740 (-)
LOC110493230 LOC106565592 coding downstream 173091 59911534 ~ 59990825 (-)
atf1 LOC106565593 coding downstream 258727 59878319 ~ 59905189 (-)
LOC118940153 LOC106565586 coding upstream 27610 60191725 ~ 60193447 (-)
LOC110494258 LOC106565585 coding upstream 33505 60197620 ~ 60223564 (-)
thumpd3 thumpd3 coding upstream 71760 60235875 ~ 60244818 (-)
LOC118940555 NA coding upstream 92733 60256848 ~ 60257008 (-)
LOC110494265 cav3 coding upstream 435973 60600088 ~ 60602922 (-)
G1471067 NA non-coding downstream 8547 60154843 ~ 60155369 (-)
G1471063 NA non-coding downstream 13529 60150188 ~ 60150387 (-)
G1471060 NA non-coding downstream 16593 60147109 ~ 60147323 (-)
G1471057 NA non-coding downstream 20104 60143557 ~ 60143812 (-)
G1471053 NA non-coding downstream 25178 60138537 ~ 60138738 (-)
G1471075 NA non-coding upstream 2298 60166413 ~ 60166653 (-)
G1471078 NA non-coding upstream 4825 60168940 ~ 60169249 (-)
G1471079 NA non-coding upstream 6887 60171002 ~ 60171263 (-)
G1471093 NA non-coding upstream 22874 60186989 ~ 60187190 (-)
G1471095 NA non-coding upstream 25577 60189692 ~ 60189976 (-)
G1470802 NA other downstream 487222 59674541 ~ 59676694 (-)
hig1a hig1a other downstream 2931209 57229440 ~ 57233433 (-)
elmo2 LOC106565399 other downstream 3663591 56494856 ~ 56530610 (-)
G1471219 srgap3 other upstream 211631 60375633 ~ 60376864 (-)
G1471564 NA other upstream 474065 60638180 ~ 60639335 (-)
ccdc174 NA other upstream 2082264 62246379 ~ 62250654 (-)
G1473866 NA other upstream 2566038 62730153 ~ 62730503 (-)
G1474395 NA other upstream 2884524 63048639 ~ 63100752 (-)

Expression



Co-expression Network