Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471079 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60171002 ~ 60171263 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682534 | True | 262 | lncRNA | 0.34 | 1 | 60171002 | 60171263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494257 | LOC106565586 | coding | downstream | 60753 | 60104033 ~ 60110249 (-) |
| LOC110494254 | LOC106565589 | coding | downstream | 142351 | 60008004 ~ 60028651 (-) |
| LOC110494253 | LOC106565590 | coding | downstream | 171262 | 59990975 ~ 59999740 (-) |
| LOC110493230 | LOC106565592 | coding | downstream | 180177 | 59911534 ~ 59990825 (-) |
| atf1 | LOC106565593 | coding | downstream | 265813 | 59878319 ~ 59905189 (-) |
| LOC118940153 | LOC106565586 | coding | upstream | 20462 | 60191725 ~ 60193447 (-) |
| LOC110494258 | LOC106565585 | coding | upstream | 26357 | 60197620 ~ 60223564 (-) |
| thumpd3 | thumpd3 | coding | upstream | 64612 | 60235875 ~ 60244818 (-) |
| LOC118940555 | NA | coding | upstream | 85585 | 60256848 ~ 60257008 (-) |
| LOC110494265 | cav3 | coding | upstream | 428825 | 60600088 ~ 60602922 (-) |
| G1471078 | NA | non-coding | downstream | 1753 | 60168940 ~ 60169249 (-) |
| G1471075 | NA | non-coding | downstream | 4349 | 60166413 ~ 60166653 (-) |
| G1471074 | NA | non-coding | downstream | 6887 | 60163916 ~ 60164115 (-) |
| G1471067 | NA | non-coding | downstream | 15633 | 60154843 ~ 60155369 (-) |
| G1471063 | NA | non-coding | downstream | 20615 | 60150188 ~ 60150387 (-) |
| G1471093 | NA | non-coding | upstream | 15726 | 60186989 ~ 60187190 (-) |
| G1471095 | NA | non-coding | upstream | 18429 | 60189692 ~ 60189976 (-) |
| G1471119 | NA | non-coding | upstream | 56480 | 60227743 ~ 60228037 (-) |
| G1471120 | NA | non-coding | upstream | 57611 | 60228874 ~ 60229194 (-) |
| G1471124 | NA | non-coding | upstream | 61372 | 60232635 ~ 60232857 (-) |
| G1470802 | NA | other | downstream | 494308 | 59674541 ~ 59676694 (-) |
| hig1a | hig1a | other | downstream | 2938295 | 57229440 ~ 57233433 (-) |
| elmo2 | LOC106565399 | other | downstream | 3670677 | 56494856 ~ 56530610 (-) |
| G1471219 | srgap3 | other | upstream | 204483 | 60375633 ~ 60376864 (-) |
| G1471564 | NA | other | upstream | 466917 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 2075116 | 62246379 ~ 62250654 (-) |
| G1473866 | NA | other | upstream | 2558890 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 2877376 | 63048639 ~ 63100752 (-) |
