Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471095 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60189692 ~ 60189976 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682550 | True | 285 | lncRNA | 0.43 | 1 | 60189692 | 60189976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494257 | LOC106565586 | coding | downstream | 79443 | 60104033 ~ 60110249 (-) |
| LOC110494254 | LOC106565589 | coding | downstream | 161041 | 60008004 ~ 60028651 (-) |
| LOC110494253 | LOC106565590 | coding | downstream | 189952 | 59990975 ~ 59999740 (-) |
| LOC110493230 | LOC106565592 | coding | downstream | 198867 | 59911534 ~ 59990825 (-) |
| atf1 | LOC106565593 | coding | downstream | 284503 | 59878319 ~ 59905189 (-) |
| LOC118940153 | LOC106565586 | coding | upstream | 1749 | 60191725 ~ 60193447 (-) |
| LOC110494258 | LOC106565585 | coding | upstream | 7644 | 60197620 ~ 60223564 (-) |
| thumpd3 | thumpd3 | coding | upstream | 45899 | 60235875 ~ 60244818 (-) |
| LOC118940555 | NA | coding | upstream | 66872 | 60256848 ~ 60257008 (-) |
| LOC110494265 | cav3 | coding | upstream | 410112 | 60600088 ~ 60602922 (-) |
| G1471093 | NA | non-coding | downstream | 2502 | 60186989 ~ 60187190 (-) |
| G1471079 | NA | non-coding | downstream | 18429 | 60171002 ~ 60171263 (-) |
| G1471078 | NA | non-coding | downstream | 20443 | 60168940 ~ 60169249 (-) |
| G1471075 | NA | non-coding | downstream | 23039 | 60166413 ~ 60166653 (-) |
| G1471074 | NA | non-coding | downstream | 25577 | 60163916 ~ 60164115 (-) |
| G1471119 | NA | non-coding | upstream | 37767 | 60227743 ~ 60228037 (-) |
| G1471120 | NA | non-coding | upstream | 38898 | 60228874 ~ 60229194 (-) |
| G1471124 | NA | non-coding | upstream | 42659 | 60232635 ~ 60232857 (-) |
| G1471083 | LOC106565584 | non-coding | upstream | 55513 | 60245489 ~ 60247884 (-) |
| G1471206 | NA | non-coding | upstream | 160506 | 60350482 ~ 60351321 (-) |
| G1470802 | NA | other | downstream | 512998 | 59674541 ~ 59676694 (-) |
| hig1a | hig1a | other | downstream | 2956985 | 57229440 ~ 57233433 (-) |
| elmo2 | LOC106565399 | other | downstream | 3689367 | 56494856 ~ 56530610 (-) |
| G1471219 | srgap3 | other | upstream | 185770 | 60375633 ~ 60376864 (-) |
| G1471564 | NA | other | upstream | 448204 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 2056403 | 62246379 ~ 62250654 (-) |
| G1473866 | NA | other | upstream | 2540177 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 2858663 | 63048639 ~ 63100752 (-) |
