Gene
RNA
| Item | Value |
|---|---|
| gene id | G1470664 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60192175 ~ 60192408 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682079 | True | 234 | lncRNA | 0.35 | 1 | 60192175 | 60192408 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494256 | LOC106565588 | coding | upstream | 96805 | 60078750 ~ 60095370 (+) |
| LOC110494255 | LOC106565587 | coding | upstream | 113738 | 60063250 ~ 60078437 (+) |
| LOC110494251 | LOC106565596 | coding | upstream | 305133 | 59857225 ~ 59887042 (+) |
| LOC110494250 | LOC106565597 | coding | upstream | 522068 | 59657801 ~ 59670107 (+) |
| LOC118940557 | NA | coding | upstream | 569689 | 59622361 ~ 59622486 (+) |
| LOC110494259 | LOC106565584 | coding | downstream | 52377 | 60244785 ~ 60247910 (+) |
| srgap3 | srgap3 | coding | downstream | 73071 | 60265479 ~ 60383800 (+) |
| rad18 | rad18 | coding | downstream | 241518 | 60433926 ~ 60508595 (+) |
| LOC110494264 | oxtr | coding | downstream | 383270 | 60575678 ~ 60599614 (+) |
| LOC110494272 | gpx1 | coding | downstream | 777916 | 60970324 ~ 60971719 (+) |
| G1470655 | NA | non-coding | upstream | 14418 | 60177556 ~ 60177757 (+) |
| G1470652 | NA | non-coding | upstream | 19023 | 60172943 ~ 60173152 (+) |
| G1470650 | NA | non-coding | upstream | 20948 | 60170969 ~ 60171227 (+) |
| G1470649 | NA | non-coding | upstream | 21717 | 60170147 ~ 60170458 (+) |
| G1470648 | NA | non-coding | upstream | 22391 | 60169578 ~ 60169784 (+) |
| G1470665 | LOC106565586 | non-coding | downstream | 233 | 60192641 ~ 60192900 (+) |
| G1470666 | LOC106565586 | non-coding | downstream | 502 | 60192910 ~ 60193219 (+) |
| G1470701 | NA | non-coding | downstream | 58444 | 60250852 ~ 60251056 (+) |
| G1470689 | NA | non-coding | downstream | 68094 | 60260502 ~ 60261000 (+) |
| G1470607 | NA | other | upstream | 88168 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 1684290 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 2577875 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 2643997 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 2708586 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 780070 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 1363911 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 2506095 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 2517931 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 3024540 | 63216948 ~ 63217594 (+) |
