G1470666 (LOC106565586)


Basic Information

Item Value
gene id G1470666
gene name LOC106565586
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60192910 ~ 60193219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1682081
GAAATTCAGAATGGACGTGAAAGCCCCGGGGTGTCTGTCAAAAAAGTACTCATTATCATCCAAACTGTAGTCGTCGCATATCTCCATGAGAGACTCGTGGGTGTTACAGTCTCGTAGTTTGCCCAGCCTTGTTCGCGGCAACCTGTCCAGCGTTCTCCATAGAACTTCGTGGAGGAGACCCCCAACATTGAGTCTAACCCGACGGTAGTGCGCCTTGCTCCGGATTATTTCCACCGGCTCCGGTGGAAGCGAGGTGGTCGACCGAGAGCCCCCTTTAATCATCCTCACTCAAGACGTTCAGTCACTTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1682081 True 310 lncRNA 0.53 1 60192910 60193219

Neighbor

gene id symbol gene type direction distance location
LOC110494256 LOC106565588 coding upstream 97540 60078750 ~ 60095370 (+)
LOC110494255 LOC106565587 coding upstream 114473 60063250 ~ 60078437 (+)
LOC110494251 LOC106565596 coding upstream 305868 59857225 ~ 59887042 (+)
LOC110494250 LOC106565597 coding upstream 522803 59657801 ~ 59670107 (+)
LOC118940557 NA coding upstream 570424 59622361 ~ 59622486 (+)
LOC110494259 LOC106565584 coding downstream 51566 60244785 ~ 60247910 (+)
srgap3 srgap3 coding downstream 72260 60265479 ~ 60383800 (+)
rad18 rad18 coding downstream 240707 60433926 ~ 60508595 (+)
LOC110494264 oxtr coding downstream 382459 60575678 ~ 60599614 (+)
LOC110494272 gpx1 coding downstream 777105 60970324 ~ 60971719 (+)
G1470665 LOC106565586 non-coding upstream 10 60192641 ~ 60192900 (+)
G1470664 NA non-coding upstream 502 60192175 ~ 60192408 (+)
G1470655 NA non-coding upstream 15153 60177556 ~ 60177757 (+)
G1470652 NA non-coding upstream 19758 60172943 ~ 60173152 (+)
G1470650 NA non-coding upstream 21683 60170969 ~ 60171227 (+)
G1470701 NA non-coding downstream 57633 60250852 ~ 60251056 (+)
G1470689 NA non-coding downstream 67283 60260502 ~ 60261000 (+)
G1470713 NA non-coding downstream 71501 60264720 ~ 60264923 (+)
G1470773 NA non-coding downstream 173932 60367151 ~ 60367406 (+)
G1470607 NA other upstream 88903 60101892 ~ 60104007 (+)
G1469076 NA other upstream 1685025 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2578610 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2644732 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2709321 57478797 ~ 57554480 (+)
G1471723 LOC100380707 other downstream 779259 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1363100 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2505284 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2517120 62710339 ~ 62711136 (+)
G1474159 NA other downstream 3023729 63216948 ~ 63217594 (+)

Expression


Co-expression Network