Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471124 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60232635 ~ 60232857 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682580 | True | 223 | lncRNA | 0.40 | 1 | 60232635 | 60232857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494258 | LOC106565585 | coding | downstream | 9071 | 60197620 ~ 60223564 (-) |
| LOC118940153 | LOC106565586 | coding | downstream | 39188 | 60191725 ~ 60193447 (-) |
| LOC110494257 | LOC106565586 | coding | downstream | 122386 | 60104033 ~ 60110249 (-) |
| LOC110494254 | LOC106565589 | coding | downstream | 203984 | 60008004 ~ 60028651 (-) |
| LOC110494253 | LOC106565590 | coding | downstream | 232895 | 59990975 ~ 59999740 (-) |
| thumpd3 | thumpd3 | coding | upstream | 3018 | 60235875 ~ 60244818 (-) |
| LOC118940555 | NA | coding | upstream | 23991 | 60256848 ~ 60257008 (-) |
| LOC110494265 | cav3 | coding | upstream | 367231 | 60600088 ~ 60602922 (-) |
| LOC110494266 | LOC106565579 | coding | upstream | 383391 | 60616248 ~ 60618713 (-) |
| LOC110495180 | LOC106565578 | coding | upstream | 393327 | 60626184 ~ 60631176 (-) |
| G1471120 | NA | non-coding | downstream | 3441 | 60228874 ~ 60229194 (-) |
| G1471119 | NA | non-coding | downstream | 4598 | 60227743 ~ 60228037 (-) |
| G1471095 | NA | non-coding | downstream | 42659 | 60189692 ~ 60189976 (-) |
| G1471093 | NA | non-coding | downstream | 45445 | 60186989 ~ 60187190 (-) |
| G1471079 | NA | non-coding | downstream | 61372 | 60171002 ~ 60171263 (-) |
| G1471083 | LOC106565584 | non-coding | upstream | 12632 | 60245489 ~ 60247884 (-) |
| G1471206 | NA | non-coding | upstream | 117625 | 60350482 ~ 60351321 (-) |
| G1471213 | NA | non-coding | upstream | 136097 | 60368954 ~ 60370065 (-) |
| G1471214 | NA | non-coding | upstream | 137239 | 60370096 ~ 60370433 (-) |
| G1471215 | NA | non-coding | upstream | 138339 | 60371196 ~ 60371471 (-) |
| G1470802 | NA | other | downstream | 555941 | 59674541 ~ 59676694 (-) |
| hig1a | hig1a | other | downstream | 2999928 | 57229440 ~ 57233433 (-) |
| elmo2 | LOC106565399 | other | downstream | 3732310 | 56494856 ~ 56530610 (-) |
| G1471219 | srgap3 | other | upstream | 142889 | 60375633 ~ 60376864 (-) |
| G1471564 | NA | other | upstream | 405323 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 2013522 | 62246379 ~ 62250654 (-) |
| G1473866 | NA | other | upstream | 2497296 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 2815782 | 63048639 ~ 63100752 (-) |
