Gene
RNA
| Item | Value |
|---|---|
| gene id | G1470701 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60250852 ~ 60251056 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682119 | True | 205 | lncRNA | 0.40 | 1 | 60250852 | 60251056 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494259 | LOC106565584 | coding | upstream | 2942 | 60244785 ~ 60247910 (+) |
| LOC110494256 | LOC106565588 | coding | upstream | 155482 | 60078750 ~ 60095370 (+) |
| LOC110494255 | LOC106565587 | coding | upstream | 172415 | 60063250 ~ 60078437 (+) |
| LOC110494251 | LOC106565596 | coding | upstream | 363810 | 59857225 ~ 59887042 (+) |
| LOC110494250 | LOC106565597 | coding | upstream | 580745 | 59657801 ~ 59670107 (+) |
| srgap3 | srgap3 | coding | downstream | 14423 | 60265479 ~ 60383800 (+) |
| rad18 | rad18 | coding | downstream | 182870 | 60433926 ~ 60508595 (+) |
| LOC110494264 | oxtr | coding | downstream | 324622 | 60575678 ~ 60599614 (+) |
| LOC110494272 | gpx1 | coding | downstream | 719268 | 60970324 ~ 60971719 (+) |
| LOC110494274 | brk1 | coding | downstream | 763669 | 61014725 ~ 61019187 (+) |
| G1470666 | LOC106565586 | non-coding | upstream | 57633 | 60192910 ~ 60193219 (+) |
| G1470665 | LOC106565586 | non-coding | upstream | 57952 | 60192641 ~ 60192900 (+) |
| G1470664 | NA | non-coding | upstream | 58444 | 60192175 ~ 60192408 (+) |
| G1470655 | NA | non-coding | upstream | 73095 | 60177556 ~ 60177757 (+) |
| G1470689 | NA | non-coding | downstream | 9446 | 60260502 ~ 60261000 (+) |
| G1470713 | NA | non-coding | downstream | 13664 | 60264720 ~ 60264923 (+) |
| G1470773 | NA | non-coding | downstream | 116095 | 60367151 ~ 60367406 (+) |
| G1470776 | NA | non-coding | downstream | 132852 | 60383908 ~ 60384114 (+) |
| G1470607 | NA | other | upstream | 146845 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 1742967 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 2636552 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 2702674 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 2767263 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 721422 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 1305263 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 2447447 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 2459283 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 2965892 | 63216948 ~ 63217594 (+) |
