Gene
RNA
| Item | Value |
|---|---|
| gene id | G1470773 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60367151 ~ 60367406 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682193 | True | 256 | lncRNA | 0.39 | 1 | 60367151 | 60367406 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494259 | LOC106565584 | coding | upstream | 119241 | 60244785 ~ 60247910 (+) |
| LOC110494256 | LOC106565588 | coding | upstream | 271781 | 60078750 ~ 60095370 (+) |
| LOC110494255 | LOC106565587 | coding | upstream | 288714 | 60063250 ~ 60078437 (+) |
| LOC110494251 | LOC106565596 | coding | upstream | 480109 | 59857225 ~ 59887042 (+) |
| LOC110494250 | LOC106565597 | coding | upstream | 697044 | 59657801 ~ 59670107 (+) |
| rad18 | rad18 | coding | downstream | 66520 | 60433926 ~ 60508595 (+) |
| LOC110494264 | oxtr | coding | downstream | 208272 | 60575678 ~ 60599614 (+) |
| LOC110494272 | gpx1 | coding | downstream | 602918 | 60970324 ~ 60971719 (+) |
| LOC110494274 | brk1 | coding | downstream | 647319 | 61014725 ~ 61019187 (+) |
| LOC110494275 | LOC106565569 | coding | downstream | 657302 | 61024708 ~ 61037602 (+) |
| G1470713 | NA | non-coding | upstream | 102228 | 60264720 ~ 60264923 (+) |
| G1470689 | NA | non-coding | upstream | 106151 | 60260502 ~ 60261000 (+) |
| G1470701 | NA | non-coding | upstream | 116095 | 60250852 ~ 60251056 (+) |
| G1470666 | LOC106565586 | non-coding | upstream | 173932 | 60192910 ~ 60193219 (+) |
| srgap3 | srgap3 | non-coding | downstream | 12410 | 60265479 ~ 60383800 (+) |
| G1470776 | NA | non-coding | downstream | 16502 | 60383908 ~ 60384114 (+) |
| G1470777 | NA | non-coding | downstream | 17890 | 60385296 ~ 60385558 (+) |
| G1471243 | NA | non-coding | downstream | 47952 | 60415358 ~ 60415567 (+) |
| G1471250 | NA | non-coding | downstream | 51263 | 60418669 ~ 60419077 (+) |
| G1470607 | NA | other | upstream | 263144 | 60101892 ~ 60104007 (+) |
| G1469076 | NA | other | upstream | 1859266 | 58507297 ~ 58507885 (+) |
| G1467219 | NA | other | upstream | 2752851 | 57589865 ~ 57614300 (+) |
| LOC110494206 | LOC108254821 | other | upstream | 2818973 | 57498305 ~ 57548178 (+) |
| G1467159 | LOC106565433 | other | upstream | 2883562 | 57478797 ~ 57554480 (+) |
| G1471723 | LOC100380707 | other | downstream | 605072 | 60972478 ~ 60999063 (+) |
| LOC110494283 | LOC106565563 | other | downstream | 1188913 | 61555873 ~ 61558328 (+) |
| G1473171 | LOC106581772 | other | downstream | 2331097 | 62698503 ~ 62698815 (+) |
| G1473177 | NA | other | downstream | 2342933 | 62710339 ~ 62711136 (+) |
| G1474159 | NA | other | downstream | 2849542 | 63216948 ~ 63217594 (+) |
