Gene
RNA
| Item | Value |
|---|---|
| gene id | G1471218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 60373592 ~ 60374005 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106605384, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1682684 | True | 414 | lncRNA | 0.51 | 1 | 60373592 | 60374005 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940555 | NA | coding | downstream | 116584 | 60256848 ~ 60257008 (-) |
| thumpd3 | thumpd3 | coding | downstream | 128774 | 60235875 ~ 60244818 (-) |
| LOC110494258 | LOC106565585 | coding | downstream | 150028 | 60197620 ~ 60223564 (-) |
| LOC118940153 | LOC106565586 | coding | downstream | 180145 | 60191725 ~ 60193447 (-) |
| LOC110494257 | LOC106565586 | coding | downstream | 263343 | 60104033 ~ 60110249 (-) |
| LOC110494265 | cav3 | coding | upstream | 226083 | 60600088 ~ 60602922 (-) |
| LOC110494266 | LOC106565579 | coding | upstream | 242243 | 60616248 ~ 60618713 (-) |
| LOC110495180 | LOC106565578 | coding | upstream | 252179 | 60626184 ~ 60631176 (-) |
| LOC110494267 | LOC106565611 | coding | upstream | 271004 | 60645009 ~ 60652846 (-) |
| LOC110495181 | LOC106565577 | coding | upstream | 283131 | 60657136 ~ 60678786 (-) |
| G1471217 | NA | non-coding | downstream | 162 | 60373220 ~ 60373430 (-) |
| G1471216 | NA | non-coding | downstream | 876 | 60372332 ~ 60372716 (-) |
| G1471215 | NA | non-coding | downstream | 2121 | 60371196 ~ 60371471 (-) |
| G1471214 | NA | non-coding | downstream | 3159 | 60370096 ~ 60370433 (-) |
| G1471213 | NA | non-coding | downstream | 3527 | 60368954 ~ 60370065 (-) |
| G1471219 | srgap3 | non-coding | upstream | 1628 | 60375633 ~ 60376864 (-) |
| G1471223 | NA | non-coding | upstream | 8677 | 60382682 ~ 60383404 (-) |
| G1471225 | NA | non-coding | upstream | 10680 | 60384685 ~ 60384923 (-) |
| G1471226 | NA | non-coding | upstream | 11486 | 60385491 ~ 60385735 (-) |
| G1471227 | NA | non-coding | upstream | 13934 | 60387939 ~ 60388423 (-) |
| LOC110494253 | LOC106565590 | other | downstream | 377266 | 59990975 ~ 59999740 (-) |
| G1470802 | NA | other | downstream | 696898 | 59674541 ~ 59676694 (-) |
| hig1a | hig1a | other | downstream | 3140885 | 57229440 ~ 57233433 (-) |
| elmo2 | LOC106565399 | other | downstream | 3873267 | 56494856 ~ 56530610 (-) |
| G1471564 | NA | other | upstream | 264175 | 60638180 ~ 60639335 (-) |
| ccdc174 | NA | other | upstream | 1872374 | 62246379 ~ 62250654 (-) |
| G1473866 | NA | other | upstream | 2356148 | 62730153 ~ 62730503 (-) |
| G1474395 | NA | other | upstream | 2674634 | 63048639 ~ 63100752 (-) |
