G1471223


Basic Information

Item Value
gene id G1471223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60382682 ~ 60383404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1682692
gaaacatttgtttttatttggACATAAGGGTTCTCAACATCCATTACATCACAAGGGATTCAACCAATCAGACACTCATGAACAGACAGCATCACTAGACAcatgttaaagagagagagagagagagagaaaaaagagggtAAACAGTATGACAACAACTCACACTAACCAATATAGGCACTCAGCCACTCAGCCGGTCTCTGAATGCCTCTTTGTAAGCATTGTTATCTTATCCAACATACAAAAGACATGACCTATTTTTAGCATACATTCCAGAAATCACATAGAGCTTAGAGAGGAAAGAGTGCACCAATTGTCTTATAAACCGTGCAAGTAGAGGAGCTAGGATATATTGACAGACCCACTGTTGCCTACAACAACGCAATGATGCTTGAGCTATGAAGGAGGATGATCAGTATAAGAGAGaactgaaaaaaatatgaaattattGTTGAGTGTACAGTAGTCTTCTTCATAAATCTATTACCCTTCCATGAATCACCTAGAACATATTAGGTAATACATTCTACAAGTAAATACTACATTTCAGTCATTCTGTTAGTAGACATCTGAAGAGTAGCAATTCCTCTATAGCAAAGTGTACAGTACATATTTACATCATTCTTGTTTTCACATATTCCTCAGATGAAATGATGTGTGTGATGTAACACTGAAGGGAAAAATATGATAAAAGTTTATACCAAACATGACTGACAACATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1682692 True 723 lncRNA 0.36 1 60382682 60383404

Neighbor

gene id symbol gene type direction distance location
LOC118940555 NA coding downstream 125674 60256848 ~ 60257008 (-)
thumpd3 thumpd3 coding downstream 137864 60235875 ~ 60244818 (-)
LOC110494258 LOC106565585 coding downstream 159118 60197620 ~ 60223564 (-)
LOC118940153 LOC106565586 coding downstream 189235 60191725 ~ 60193447 (-)
LOC110494257 LOC106565586 coding downstream 272433 60104033 ~ 60110249 (-)
LOC110494265 cav3 coding upstream 216684 60600088 ~ 60602922 (-)
LOC110494266 LOC106565579 coding upstream 232844 60616248 ~ 60618713 (-)
LOC110495180 LOC106565578 coding upstream 242780 60626184 ~ 60631176 (-)
LOC110494267 LOC106565611 coding upstream 261605 60645009 ~ 60652846 (-)
LOC110495181 LOC106565577 coding upstream 273732 60657136 ~ 60678786 (-)
G1471219 srgap3 non-coding downstream 5818 60375633 ~ 60376864 (-)
G1471218 NA non-coding downstream 8677 60373592 ~ 60374005 (-)
G1471217 NA non-coding downstream 9252 60373220 ~ 60373430 (-)
G1471216 NA non-coding downstream 9966 60372332 ~ 60372716 (-)
G1471215 NA non-coding downstream 11211 60371196 ~ 60371471 (-)
G1471225 NA non-coding upstream 1281 60384685 ~ 60384923 (-)
G1471226 NA non-coding upstream 2087 60385491 ~ 60385735 (-)
G1471227 NA non-coding upstream 4535 60387939 ~ 60388423 (-)
G1471231 NA non-coding upstream 12190 60395594 ~ 60395798 (-)
G1471234 NA non-coding upstream 19965 60403369 ~ 60403578 (-)
LOC110494253 LOC106565590 other downstream 386356 59990975 ~ 59999740 (-)
G1470802 NA other downstream 705988 59674541 ~ 59676694 (-)
hig1a hig1a other downstream 3149975 57229440 ~ 57233433 (-)
G1471564 NA other upstream 254776 60638180 ~ 60639335 (-)
ccdc174 NA other upstream 1862975 62246379 ~ 62250654 (-)
G1473866 NA other upstream 2346749 62730153 ~ 62730503 (-)
G1474395 NA other upstream 2665235 63048639 ~ 63100752 (-)
G1474425 LOC106565679 other upstream 2750421 63133825 ~ 63145087 (-)

Expression


Co-expression Network