G1471243


Basic Information

Item Value
gene id G1471243
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 60415358 ~ 60415567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1682712
gggcaactaaggagtggctccgtaagaagcatctcaaggtcctggagtgacctagccagtctccagacctgaacccaatagaaaatctttggagggagctgaaagtccgtattgcccagcgacagccctgaaacctgaaggatctggagaaggtctgtatggaggagtgggccaaaatccctgctgcagtgtgtgcaaacctggtcaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1682712 True 210 lncRNA 0.53 1 60415358 60415567

Neighbor

gene id symbol gene type direction distance location
srgap3 srgap3 coding upstream 31947 60265479 ~ 60383800 (+)
LOC110494259 LOC106565584 coding upstream 167448 60244785 ~ 60247910 (+)
LOC110494256 LOC106565588 coding upstream 319988 60078750 ~ 60095370 (+)
LOC110494255 LOC106565587 coding upstream 336921 60063250 ~ 60078437 (+)
LOC110494251 LOC106565596 coding upstream 528316 59857225 ~ 59887042 (+)
rad18 rad18 coding downstream 18359 60433926 ~ 60508595 (+)
LOC110494264 oxtr coding downstream 160111 60575678 ~ 60599614 (+)
LOC110494272 gpx1 coding downstream 554757 60970324 ~ 60971719 (+)
LOC110494274 brk1 coding downstream 599158 61014725 ~ 61019187 (+)
LOC110494275 LOC106565569 coding downstream 609141 61024708 ~ 61037602 (+)
G1470777 NA non-coding upstream 29800 60385296 ~ 60385558 (+)
G1470776 NA non-coding upstream 31244 60383908 ~ 60384114 (+)
G1470773 NA non-coding upstream 47952 60367151 ~ 60367406 (+)
G1470713 NA non-coding upstream 150435 60264720 ~ 60264923 (+)
G1471250 NA non-coding downstream 3102 60418669 ~ 60419077 (+)
G1471261 NA non-coding downstream 10391 60425958 ~ 60426167 (+)
G1471265 NA non-coding downstream 11991 60427558 ~ 60427761 (+)
G1471279 NA non-coding downstream 93064 60508631 ~ 60509137 (+)
G1471395 NA non-coding downstream 94894 60510461 ~ 60510808 (+)
G1470607 NA other upstream 311351 60101892 ~ 60104007 (+)
G1469076 NA other upstream 1907473 58507297 ~ 58507885 (+)
G1467219 NA other upstream 2801058 57589865 ~ 57614300 (+)
LOC110494206 LOC108254821 other upstream 2867180 57498305 ~ 57548178 (+)
G1467159 LOC106565433 other upstream 2931769 57478797 ~ 57554480 (+)
G1471723 LOC100380707 other downstream 556911 60972478 ~ 60999063 (+)
LOC110494283 LOC106565563 other downstream 1140752 61555873 ~ 61558328 (+)
G1473171 LOC106581772 other downstream 2282936 62698503 ~ 62698815 (+)
G1473177 NA other downstream 2294772 62710339 ~ 62711136 (+)
G1474159 NA other downstream 2801381 63216948 ~ 63217594 (+)

Expression


Co-expression Network